Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Gm14071-201ENSMUST00000117817 509 ntBASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Gm13408-201ENSMUST00000119822 798 ntBASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Gm13935-201ENSMUST00000121859 798 ntBASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Gm24844-201ENSMUST00000158679 127 ntBASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Gm8459-201ENSMUST00000162504 760 ntBASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Gm42997-202ENSMUST00000200321 985 ntBASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.97□□□□□ -0.49
Syne3Q4FZC9 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Syne3Q4FZC9 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Syne3Q4FZC9 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Gm11956-201ENSMUST00000119525 512 ntBASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Syne3Q4FZC9 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Gm44100-201ENSMUST00000204329 436 ntBASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Syne3Q4FZC9 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Syne3Q4FZC9 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Syne3Q4FZC9 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Syne3Q4FZC9 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Syne3Q4FZC9 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Syne3Q4FZC9 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Syne3Q4FZC9 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Syne3Q4FZC9 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Syne3Q4FZC9 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Syne3Q4FZC9 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Syne3Q4FZC9 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.96□□□□□ -0.5
Syne3Q4FZC9 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Syne3Q4FZC9 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Gm12247-201ENSMUST00000117585 670 ntBASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Gm15352-201ENSMUST00000118696 270 ntBASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Gm4726-201ENSMUST00000135604 736 ntBASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Gm6019-201ENSMUST00000148369 736 ntBASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Gm3329-201ENSMUST00000159873 556 ntBASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Syne3Q4FZC9 Gm7741-201ENSMUST00000181445 989 ntBASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms