Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm9673-201ENSMUST00000119287 781 ntBASIC11.46□□□□□ -0.57
Ebf1Q07802 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.46□□□□□ -0.57
Ebf1Q07802 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 Gm8197-202ENSMUST00000193422 934 ntBASIC11.46□□□□□ -0.57
Ebf1Q07802 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.46□□□□□ -0.57
Ebf1Q07802 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 Gm7082-201ENSMUST00000209880 969 ntBASIC11.46□□□□□ -0.57
Ebf1Q07802 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ebf1Q07802 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.46□□□□□ -0.57
Ebf1Q07802 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC11.46□□□□□ -0.57
Ebf1Q07802 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf1Q07802 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Ebf1Q07802 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ebf1Q07802 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Ebf1Q07802 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ebf1Q07802 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ebf1Q07802 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Ebf1Q07802 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ebf1Q07802 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ebf1Q07802 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ebf1Q07802 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ebf1Q07802 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ebf1Q07802 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.45□□□□□ -0.58
Ebf1Q07802 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Gm11470-201ENSMUST00000118868 1475 ntBASIC11.45□□□□□ -0.58
Ebf1Q07802 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ebf1Q07802 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.45□□□□□ -0.58
Ebf1Q07802 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ebf1Q07802 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Ebf1Q07802 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ebf1Q07802 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ebf1Q07802 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ebf1Q07802 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Ebf1Q07802 Gm11500-201ENSMUST00000118237 601 ntBASIC11.45□□□□□ -0.58
Ebf1Q07802 Gm7541-201ENSMUST00000118361 535 ntBASIC11.45□□□□□ -0.58
Ebf1Q07802 Gm12791-201ENSMUST00000120788 655 ntBASIC11.45□□□□□ -0.58
Ebf1Q07802 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.45□□□□□ -0.58
Ebf1Q07802 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Gm17214-201ENSMUST00000164501 541 ntBASIC11.45□□□□□ -0.58
Ebf1Q07802 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.45□□□□□ -0.58
Ebf1Q07802 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.45□□□□□ -0.58
Ebf1Q07802 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC11.45□□□□□ -0.58
Ebf1Q07802 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.45□□□□□ -0.58
Ebf1Q07802 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.45□□□□□ -0.58
Ebf1Q07802 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Ebf1Q07802 Gm3433-201ENSMUST00000210149 1058 ntBASIC11.45□□□□□ -0.58
Ebf1Q07802 Gm5996-201ENSMUST00000211110 718 ntBASIC11.45□□□□□ -0.58
Ebf1Q07802 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Gm6390-201ENSMUST00000215034 589 ntBASIC11.45□□□□□ -0.58
Ebf1Q07802 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC11.45□□□□□ -0.58
Ebf1Q07802 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ebf1Q07802 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ebf1Q07802 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.45□□□□□ -0.58
Ebf1Q07802 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.45□□□□□ -0.58
Ebf1Q07802 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ebf1Q07802 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf1Q07802 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.44□□□□□ -0.58
Ebf1Q07802 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf1Q07802 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms