Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm28806-201ENSMUST00000191134 528 ntTSL 5 BASIC14.55□□□□□ -0.08
Col18a1P39061 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC14.55□□□□□ -0.08
Col18a1P39061 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC14.55□□□□□ -0.08
Col18a1P39061 Gm5543-201ENSMUST00000193329 1091 ntBASIC14.55□□□□□ -0.08
Col18a1P39061 Rce1-203ENSMUST00000224707 1255 ntBASIC14.55□□□□□ -0.08
Col18a1P39061 AC124555.1-201ENSMUST00000227051 880 ntBASIC14.55□□□□□ -0.08
Col18a1P39061 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col18a1P39061 Htr1b-201ENSMUST00000051005 1273 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Col18a1P39061 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col18a1P39061 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Col18a1P39061 Gm42521-201ENSMUST00000199190 2040 ntBASIC14.55□□□□□ -0.08
Col18a1P39061 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col18a1P39061 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Col18a1P39061 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.54□□□□□ -0.08
Col18a1P39061 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.54□□□□□ -0.08
Col18a1P39061 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col18a1P39061 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col18a1P39061 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col18a1P39061 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col18a1P39061 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col18a1P39061 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col18a1P39061 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Col18a1P39061 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Col18a1P39061 Gm7190-201ENSMUST00000118669 1452 ntBASIC14.54□□□□□ -0.08
Col18a1P39061 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col18a1P39061 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col18a1P39061 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Col18a1P39061 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col18a1P39061 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col18a1P39061 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col18a1P39061 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col18a1P39061 Gm15353-201ENSMUST00000110860 702 ntTSL 5 BASIC14.54□□□□□ -0.08
Col18a1P39061 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC14.54□□□□□ -0.08
Col18a1P39061 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC14.54□□□□□ -0.08
Col18a1P39061 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC14.54□□□□□ -0.08
Col18a1P39061 Gm28381-201ENSMUST00000188403 193 ntBASIC14.54□□□□□ -0.08
Col18a1P39061 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col18a1P39061 Gm20186-203ENSMUST00000202542 741 ntTSL 3 BASIC14.54□□□□□ -0.08
Col18a1P39061 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col18a1P39061 Tmem29-201ENSMUST00000059256 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col18a1P39061 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col18a1P39061 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col18a1P39061 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col18a1P39061 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col18a1P39061 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col18a1P39061 Serpina1b-201ENSMUST00000095450 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col18a1P39061 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col18a1P39061 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col18a1P39061 Mir704-201ENSMUST00000102106 77 ntBASIC14.53□□□□□ -0.08
Col18a1P39061 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC14.53□□□□□ -0.08
Col18a1P39061 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col18a1P39061 Gm5400-201ENSMUST00000118494 943 ntBASIC14.53□□□□□ -0.08
Col18a1P39061 Gm13071-201ENSMUST00000122237 376 ntBASIC14.53□□□□□ -0.08
Col18a1P39061 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC14.53□□□□□ -0.08
Col18a1P39061 Gm6665-201ENSMUST00000165131 258 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Col18a1P39061 Sfta2-201ENSMUST00000171166 508 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col18a1P39061 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC14.53□□□□□ -0.08
Col18a1P39061 Gm4430-202ENSMUST00000193902 1041 ntBASIC14.53□□□□□ -0.08
Col18a1P39061 Gm43833-201ENSMUST00000198828 293 ntBASIC14.53□□□□□ -0.08
Col18a1P39061 Gm29803-201ENSMUST00000205069 375 ntBASIC14.53□□□□□ -0.08
Col18a1P39061 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col18a1P39061 Gm29783-201ENSMUST00000219398 369 ntBASIC14.53□□□□□ -0.08
Col18a1P39061 4930547H16Rik-201ENSMUST00000222281 907 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col18a1P39061 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col18a1P39061 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col18a1P39061 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Col18a1P39061 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col18a1P39061 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col18a1P39061 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col18a1P39061 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col18a1P39061 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col18a1P39061 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col18a1P39061 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col18a1P39061 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col18a1P39061 Crisp4-203ENSMUST00000115344 960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col18a1P39061 Gm6141-201ENSMUST00000117181 695 ntBASIC14.52□□□□□ -0.08
Col18a1P39061 Gm26356-201ENSMUST00000158217 283 ntBASIC14.52□□□□□ -0.08
Col18a1P39061 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col18a1P39061 4930515G16Rik-201ENSMUST00000199440 1256 ntBASIC14.52□□□□□ -0.08
Col18a1P39061 Gm42821-201ENSMUST00000199771 489 ntBASIC14.52□□□□□ -0.08
Col18a1P39061 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC14.52□□□□□ -0.08
Col18a1P39061 Mettl7b-201ENSMUST00000026398 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col18a1P39061 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col18a1P39061 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC14.52□□□□□ -0.08
Col18a1P39061 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col18a1P39061 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Col18a1P39061 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col18a1P39061 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col18a1P39061 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col18a1P39061 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col18a1P39061 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col18a1P39061 Gm6721-201ENSMUST00000218353 1445 ntBASIC14.52□□□□□ -0.09
Col18a1P39061 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Col18a1P39061 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col18a1P39061 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Col18a1P39061 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.52□□□□□ -0.09
Col18a1P39061 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Col18a1P39061 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC14.52□□□□□ -0.09
Col18a1P39061 AC116589.8-201ENSMUST00000220945 364 ntTSL 2 BASIC14.52□□□□□ -0.09
Col18a1P39061 Olfr649-201ENSMUST00000060440 939 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms