Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
VimP20152 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.35□□□□□ -0.59
VimP20152 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VimP20152 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
VimP20152 Gm2423-201ENSMUST00000074863 733 ntBASIC11.35□□□□□ -0.59
VimP20152 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VimP20152 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
VimP20152 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.35□□□□□ -0.59
VimP20152 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
VimP20152 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VimP20152 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VimP20152 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VimP20152 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VimP20152 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
VimP20152 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
VimP20152 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VimP20152 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VimP20152 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
VimP20152 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
VimP20152 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
VimP20152 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VimP20152 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VimP20152 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VimP20152 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 AC108416.1-201ENSMUST00000228755 1558 ntBASIC11.34□□□□□ -0.59
VimP20152 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
VimP20152 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Gm24548-201ENSMUST00000158650 108 ntBASIC11.34□□□□□ -0.59
VimP20152 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.34□□□□□ -0.59
VimP20152 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.34□□□□□ -0.59
VimP20152 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.34□□□□□ -0.59
VimP20152 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.34□□□□□ -0.59
VimP20152 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.34□□□□□ -0.59
VimP20152 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Gm6091-201ENSMUST00000098307 165 ntBASIC11.34□□□□□ -0.59
VimP20152 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
VimP20152 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.34□□□□□ -0.59
VimP20152 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC11.34□□□□□ -0.59
VimP20152 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.34□□□□□ -0.59
VimP20152 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VimP20152 AC121870.2-201ENSMUST00000214343 1870 ntBASIC11.34□□□□□ -0.59
VimP20152 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
VimP20152 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
VimP20152 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
VimP20152 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
VimP20152 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.33□□□□□ -0.6
VimP20152 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 AC122367.1-201ENSMUST00000221978 1709 ntBASIC11.33□□□□□ -0.6
VimP20152 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Gm11989-201ENSMUST00000117240 672 ntBASIC11.33□□□□□ -0.6
VimP20152 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.33□□□□□ -0.6
VimP20152 Gm11362-201ENSMUST00000118838 850 ntBASIC11.33□□□□□ -0.6
VimP20152 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
VimP20152 Gm29649-201ENSMUST00000185649 419 ntBASIC11.33□□□□□ -0.6
VimP20152 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
VimP20152 Gm5035-201ENSMUST00000215581 927 ntBASIC11.33□□□□□ -0.6
VimP20152 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VimP20152 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC11.33□□□□□ -0.6
VimP20152 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
VimP20152 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms