Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
P04940 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
P04940 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
P04940 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
P04940 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
P04940 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
P04940 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P04940 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
P04940 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.12□□□□□ -0.95
P04940 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
P04940 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P04940 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC9.12□□□□□ -0.95
P04940 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P04940 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
P04940 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
P04940 Gm38187-201ENSMUST00000195609 4709 ntBASIC9.12□□□□□ -0.95
P04940 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC9.11□□□□□ -0.95
P04940 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 AC158355.1-201ENSMUST00000215895 1705 ntBASIC9.11□□□□□ -0.95
P04940 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.11□□□□□ -0.95
P04940 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC9.11□□□□□ -0.95
P04940 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
P04940 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC9.11□□□□□ -0.95
P04940 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
P04940 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Gm42815-201ENSMUST00000198787 1470 ntBASIC9.11□□□□□ -0.95
P04940 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC9.11□□□□□ -0.95
P04940 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Gm25076-201ENSMUST00000104098 132 ntBASIC9.11□□□□□ -0.95
P04940 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
P04940 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC9.11□□□□□ -0.95
P04940 Gm11573-201ENSMUST00000119956 394 ntBASIC9.11□□□□□ -0.95
P04940 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC9.11□□□□□ -0.95
P04940 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
P04940 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Gm28032-201ENSMUST00000184104 96 ntBASIC9.11□□□□□ -0.95
P04940 Gm37905-201ENSMUST00000195310 341 ntBASIC9.11□□□□□ -0.95
P04940 Gm30946-201ENSMUST00000198288 724 ntBASIC9.11□□□□□ -0.95
P04940 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC9.11□□□□□ -0.95
P04940 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
P04940 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC9.11□□□□□ -0.95
P04940 Gm9111-201ENSMUST00000219394 709 ntBASIC9.11□□□□□ -0.95
P04940 AC129219.2-201ENSMUST00000224324 701 ntBASIC9.11□□□□□ -0.95
P04940 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
P04940 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
P04940 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
P04940 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC9.11□□□□□ -0.95
P04940 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
P04940 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
P04940 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
P04940 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
P04940 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
P04940 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
P04940 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
P04940 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
P04940 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
P04940 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
P04940 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
P04940 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC9.1□□□□□ -0.95
P04940 Gm7642-201ENSMUST00000216345 1809 ntBASIC9.1□□□□□ -0.95
P04940 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
P04940 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
P04940 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
P04940 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
P04940 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
P04940 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
P04940 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms