Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Igh-VJ558P01758 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Igh-VJ558P01758 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Igh-VJ558P01758 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Igh-VJ558P01758 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Igh-VJ558P01758 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Igh-VJ558P01758 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Igh-VJ558P01758 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC9.71□□□□□ -0.85
Igh-VJ558P01758 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Igh-VJ558P01758 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Igh-VJ558P01758 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Igh-VJ558P01758 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC9.71□□□□□ -0.85
Igh-VJ558P01758 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Igh-VJ558P01758 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Igh-VJ558P01758 Gm5859-201ENSMUST00000165401 2324 ntBASIC9.71□□□□□ -0.85
Igh-VJ558P01758 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Igh-VJ558P01758 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Igh-VJ558P01758 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Igh-VJ558P01758 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Igh-VJ558P01758 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Igh-VJ558P01758 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Igh-VJ558P01758 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Igh-VJ558P01758 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.85
Igh-VJ558P01758 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Gm10051-201ENSMUST00000145209 414 ntBASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Gm37905-201ENSMUST00000195310 341 ntBASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Gm10699-201ENSMUST00000098916 2130 ntBASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Igh-VJ558P01758 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Gm14398-201ENSMUST00000117287 1073 ntBASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Gm15573-201ENSMUST00000119487 540 ntBASIC9.7□□□□□ -0.86
Igh-VJ558P01758 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Gm30946-201ENSMUST00000198288 724 ntBASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 AC122024.3-201ENSMUST00000217719 294 ntBASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 AC122350.1-201ENSMUST00000228135 533 ntBASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Rassf8-202ENSMUST00000058538 1131 ntBASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Gm9415-201ENSMUST00000200462 1321 ntBASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Igh-VJ558P01758 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms