Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ubr1O70481 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ubr1O70481 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ubr1O70481 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubr1O70481 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ubr1O70481 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubr1O70481 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubr1O70481 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubr1O70481 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ubr1O70481 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Ubr1O70481 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ubr1O70481 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubr1O70481 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ubr1O70481 Uba52-ps-201ENSMUST00000183770 379 ntBASIC14.34□□□□□ -0.11
Ubr1O70481 Gm9409-201ENSMUST00000197017 316 ntBASIC14.34□□□□□ -0.11
Ubr1O70481 Gm43811-201ENSMUST00000202862 695 ntBASIC14.34□□□□□ -0.11
Ubr1O70481 Arhgef33-207ENSMUST00000224966 490 ntBASIC14.34□□□□□ -0.11
Ubr1O70481 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ubr1O70481 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubr1O70481 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubr1O70481 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ubr1O70481 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ubr1O70481 Gm6560-201ENSMUST00000198588 1591 ntBASIC14.33□□□□□ -0.11
Ubr1O70481 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ubr1O70481 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ubr1O70481 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubr1O70481 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubr1O70481 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ubr1O70481 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ubr1O70481 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.33□□□□□ -0.12
Ubr1O70481 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ubr1O70481 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubr1O70481 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC14.33□□□□□ -0.12
Ubr1O70481 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ubr1O70481 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ubr1O70481 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ubr1O70481 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Ubr1O70481 Gm29543-201ENSMUST00000188138 967 ntBASIC14.33□□□□□ -0.12
Ubr1O70481 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC14.33□□□□□ -0.12
Ubr1O70481 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.33□□□□□ -0.12
Ubr1O70481 Gm38349-201ENSMUST00000195732 462 ntBASIC14.33□□□□□ -0.12
Ubr1O70481 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ubr1O70481 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Ubr1O70481 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ubr1O70481 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ubr1O70481 Gm21136-201ENSMUST00000186812 2575 ntBASIC14.33□□□□□ -0.12
Ubr1O70481 Gm6605-201ENSMUST00000031488 2574 ntBASIC14.33□□□□□ -0.12
Ubr1O70481 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Ubr1O70481 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Ubr1O70481 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubr1O70481 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubr1O70481 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubr1O70481 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ubr1O70481 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubr1O70481 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ubr1O70481 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC14.33□□□□□ -0.12
Ubr1O70481 AC166361.2-201ENSMUST00000219269 1415 ntBASIC14.33□□□□□ -0.12
Ubr1O70481 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubr1O70481 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubr1O70481 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubr1O70481 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ubr1O70481 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubr1O70481 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubr1O70481 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubr1O70481 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ubr1O70481 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC14.32□□□□□ -0.12
Ubr1O70481 Gm7985-201ENSMUST00000183329 981 ntBASIC14.32□□□□□ -0.12
Ubr1O70481 Gm28746-201ENSMUST00000187453 380 ntBASIC14.32□□□□□ -0.12
Ubr1O70481 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC14.32□□□□□ -0.12
Ubr1O70481 Gm42511-201ENSMUST00000196160 234 ntBASIC14.32□□□□□ -0.12
Ubr1O70481 Gm6439-201ENSMUST00000199849 862 ntBASIC14.32□□□□□ -0.12
Ubr1O70481 Gm18862-201ENSMUST00000204643 933 ntBASIC14.32□□□□□ -0.12
Ubr1O70481 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubr1O70481 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubr1O70481 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubr1O70481 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubr1O70481 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubr1O70481 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ubr1O70481 Gm17836-201ENSMUST00000191976 1302 ntBASIC14.32□□□□□ -0.12
Ubr1O70481 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubr1O70481 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.32□□□□□ -0.12
Ubr1O70481 Gm13120-201ENSMUST00000117343 1446 ntBASIC14.32□□□□□ -0.12
Ubr1O70481 Gm13104-201ENSMUST00000119651 1446 ntBASIC14.32□□□□□ -0.12
Ubr1O70481 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ubr1O70481 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Ubr1O70481 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubr1O70481 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubr1O70481 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ubr1O70481 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubr1O70481 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubr1O70481 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ubr1O70481 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ubr1O70481 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubr1O70481 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ubr1O70481 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ubr1O70481 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC14.32□□□□□ -0.12
Ubr1O70481 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC14.32□□□□□ -0.12
Ubr1O70481 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC14.32□□□□□ -0.12
Ubr1O70481 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC14.32□□□□□ -0.12
Ubr1O70481 Gm22994-201ENSMUST00000175422 82 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms