Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Gm37301-201ENSMUST00000195412 568 ntBASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 AY036118-201ENSMUST00000200021 923 ntBASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Gm6867-201ENSMUST00000219165 425 ntBASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdh1F7BJK1 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Gm12106-201ENSMUST00000116006 1200 ntBASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Gm8459-201ENSMUST00000162504 760 ntBASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Gm38151-201ENSMUST00000195085 289 ntBASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Gm5714-201ENSMUST00000197343 566 ntBASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Gm42867-201ENSMUST00000202995 469 ntBASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Gm270-201ENSMUST00000223010 976 ntBASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Gm26448-201ENSMUST00000082446 203 ntBASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Pcdh1F7BJK1 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.12□□□□□ -0.79
Pcdh1F7BJK1 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms