Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 AC164883.7-201ENSMUST00000228534 851 ntBASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Gm5424-201ENSMUST00000053865 1240 ntBASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.37□□□□□ -0.59
Col4a6B1AVK5 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Col4a6B1AVK5 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Gm12397-201ENSMUST00000117674 615 ntBASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Gm5274-201ENSMUST00000182641 1003 ntBASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Gm44540-201ENSMUST00000205640 354 ntBASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Gm18256-201ENSMUST00000209087 907 ntBASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Gm7242-201ENSMUST00000221134 705 ntBASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Gm4778-201ENSMUST00000098878 1098 ntBASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Gm16518-201ENSMUST00000117960 508 ntBASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Gm14650-201ENSMUST00000120400 889 ntBASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Gm6517-201ENSMUST00000121056 511 ntBASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Gm26943-201ENSMUST00000182295 957 ntBASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col4a6B1AVK5 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col4a6B1AVK5 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col4a6B1AVK5 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Col4a6B1AVK5 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col4a6B1AVK5 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col4a6B1AVK5 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col4a6B1AVK5 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col4a6B1AVK5 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col4a6B1AVK5 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Col4a6B1AVK5 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col4a6B1AVK5 Gm12736-201ENSMUST00000119330 236 ntBASIC11.35□□□□□ -0.59
Col4a6B1AVK5 Gm14231-201ENSMUST00000120090 592 ntBASIC11.35□□□□□ -0.59
Col4a6B1AVK5 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms