Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Gm25214-201ENSMUST00000104573 129 ntBASIC11.86□□□□□ -0.51
Speer3W4VSP1 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Gm14726-201ENSMUST00000120623 896 ntBASIC11.86□□□□□ -0.51
Speer3W4VSP1 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.86□□□□□ -0.51
Speer3W4VSP1 Gm14832-201ENSMUST00000121289 322 ntBASIC11.86□□□□□ -0.51
Speer3W4VSP1 Gm12269-201ENSMUST00000122273 717 ntBASIC11.86□□□□□ -0.51
Speer3W4VSP1 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC11.86□□□□□ -0.51
Speer3W4VSP1 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC11.86□□□□□ -0.51
Speer3W4VSP1 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Gm42937-201ENSMUST00000197360 752 ntBASIC11.86□□□□□ -0.51
Speer3W4VSP1 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Gm21769-201ENSMUST00000211922 111 ntBASIC11.86□□□□□ -0.51
Speer3W4VSP1 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Cts7-204ENSMUST00000225321 1257 ntBASIC11.86□□□□□ -0.51
Speer3W4VSP1 AC105408.1-201ENSMUST00000227771 802 ntBASIC11.86□□□□□ -0.51
Speer3W4VSP1 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Olfr1234-201ENSMUST00000099783 945 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Zwilch-211ENSMUST00000176794 1746 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Speer3W4VSP1 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Speer3W4VSP1 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Speer3W4VSP1 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Gm42968-201ENSMUST00000198578 1372 ntBASIC11.85□□□□□ -0.51
Speer3W4VSP1 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Gm23884-201ENSMUST00000122687 294 ntBASIC11.85□□□□□ -0.51
Speer3W4VSP1 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Speer3W4VSP1 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Gm23617-201ENSMUST00000175410 95 ntBASIC11.85□□□□□ -0.51
Speer3W4VSP1 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Speer3W4VSP1 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Speer3W4VSP1 Gm43179-201ENSMUST00000198797 275 ntBASIC11.85□□□□□ -0.51
Speer3W4VSP1 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Speer3W4VSP1 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.85□□□□□ -0.51
Speer3W4VSP1 Gm43867-201ENSMUST00000203860 525 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms