Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl28Q9JIL2 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl28Q9JIL2 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl28Q9JIL2 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Ccl28Q9JIL2 AC109214.1-201ENSMUST00000219520 1372 ntBASIC9.09□□□□□ -0.95
Ccl28Q9JIL2 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl28Q9JIL2 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl28Q9JIL2 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl28Q9JIL2 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ccl28Q9JIL2 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC9.09□□□□□ -0.95
Ccl28Q9JIL2 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Gm14724-201ENSMUST00000118400 537 ntBASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Gm8459-201ENSMUST00000162504 760 ntBASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Gm18734-201ENSMUST00000172937 808 ntBASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Gm10807-201ENSMUST00000177134 795 ntBASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Gm16505-201ENSMUST00000179981 232 ntBASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Gm8100-201ENSMUST00000182906 988 ntBASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Gm18212-201ENSMUST00000211678 889 ntBASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl28Q9JIL2 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl28Q9JIL2 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.07□□□□□ -0.96
Ccl28Q9JIL2 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl28Q9JIL2 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl28Q9JIL2 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Ccl28Q9JIL2 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl28Q9JIL2 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl28Q9JIL2 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC9.07□□□□□ -0.96
Ccl28Q9JIL2 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
Ccl28Q9JIL2 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.07□□□□□ -0.96
Ccl28Q9JIL2 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl28Q9JIL2 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl28Q9JIL2 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Ccl28Q9JIL2 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Ccl28Q9JIL2 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
Ccl28Q9JIL2 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl28Q9JIL2 Gm13916-201ENSMUST00000117368 628 ntBASIC9.07□□□□□ -0.96
Ccl28Q9JIL2 Gm14208-201ENSMUST00000119645 678 ntBASIC9.07□□□□□ -0.96
Ccl28Q9JIL2 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl28Q9JIL2 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms