Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Mcph1-205ENSMUST00000146819 2067 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Gm5270-201ENSMUST00000121506 1002 ntBASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Oosp2-201ENSMUST00000121793 677 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Gm4996-201ENSMUST00000122042 784 ntBASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Cfap100-202ENSMUST00000127508 417 ntTSL 2 BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Mir6981-201ENSMUST00000184293 115 ntBASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Gm29487-201ENSMUST00000190146 256 ntBASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Gm40723-201ENSMUST00000219407 603 ntTSL 3 BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Gm18119-201ENSMUST00000219972 616 ntBASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 8030423J24Rik-201ENSMUST00000022091 869 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 AC139155.1-201ENSMUST00000226043 444 ntBASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Krtap21-1-201ENSMUST00000078422 748 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lysmd1Q9D0E3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Calhm1-201ENSMUST00000111813 1047 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Rpsa-ps11-201ENSMUST00000118446 889 ntBASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Gm5501-201ENSMUST00000165917 832 ntBASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Gm21963-201ENSMUST00000179519 330 ntBASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Mir7011-201ENSMUST00000183768 73 ntBASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Gm28381-201ENSMUST00000188403 193 ntBASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Gm19058-201ENSMUST00000192135 598 ntBASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 1700066J03Rik-202ENSMUST00000224280 516 ntBASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 AC158122.1-201ENSMUST00000227398 673 ntBASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Cenph-201ENSMUST00000075550 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Gm10689-201ENSMUST00000098864 432 ntBASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lysmd1Q9D0E3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms