Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Gm23102-201ENSMUST00000083724 116 ntBASIC15.3■□□□□ 0.04
Rtn4Q99P72 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4Q99P72 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rtn4Q99P72 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtn4Q99P72 AC127597.1-201ENSMUST00000225697 5711 ntBASIC15.3■□□□□ 0.04
Rtn4Q99P72 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.29■□□□□ 0.04
Rtn4Q99P72 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 AC125374.1-201ENSMUST00000213573 1400 ntBASIC15.29■□□□□ 0.04
Rtn4Q99P72 Retreg1-206ENSMUST00000228306 1430 ntBASIC15.29■□□□□ 0.04
Rtn4Q99P72 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Gm12015-201ENSMUST00000117065 843 ntBASIC15.29■□□□□ 0.04
Rtn4Q99P72 Gm15754-201ENSMUST00000119191 478 ntBASIC15.29■□□□□ 0.04
Rtn4Q99P72 Gm12286-201ENSMUST00000119246 1002 ntBASIC15.29■□□□□ 0.04
Rtn4Q99P72 Gm15703-201ENSMUST00000120250 880 ntBASIC15.29■□□□□ 0.04
Rtn4Q99P72 Gm14300-201ENSMUST00000120800 946 ntBASIC15.29■□□□□ 0.04
Rtn4Q99P72 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Gm15780-201ENSMUST00000121283 935 ntBASIC15.29■□□□□ 0.04
Rtn4Q99P72 Gm8737-201ENSMUST00000122208 642 ntBASIC15.29■□□□□ 0.04
Rtn4Q99P72 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Gm18304-201ENSMUST00000189162 546 ntBASIC15.29■□□□□ 0.04
Rtn4Q99P72 Gm42599-201ENSMUST00000201308 469 ntBASIC15.29■□□□□ 0.04
Rtn4Q99P72 Gm18621-201ENSMUST00000222677 679 ntBASIC15.29■□□□□ 0.04
Rtn4Q99P72 Dhrs4-202ENSMUST00000226168 828 ntBASIC15.29■□□□□ 0.04
Rtn4Q99P72 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Cd40lg-201ENSMUST00000033466 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rtn4Q99P72 AC211878.3-201ENSMUST00000222629 2018 ntBASIC15.29■□□□□ 0.04
Rtn4Q99P72 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC15.29■□□□□ 0.04
Rtn4Q99P72 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtn4Q99P72 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4Q99P72 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4Q99P72 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4Q99P72 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.28■□□□□ 0.04
Rtn4Q99P72 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rtn4Q99P72 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4Q99P72 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4Q99P72 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4Q99P72 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4Q99P72 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4Q99P72 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC15.28■□□□□ 0.04
Rtn4Q99P72 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4Q99P72 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4Q99P72 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4Q99P72 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4Q99P72 Gm24231-201ENSMUST00000104315 133 ntBASIC15.28■□□□□ 0.04
Rtn4Q99P72 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC15.28■□□□□ 0.04
Rtn4Q99P72 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rtn4Q99P72 Gm15711-201ENSMUST00000118889 535 ntBASIC15.28■□□□□ 0.04
Rtn4Q99P72 Gm12096-201ENSMUST00000121149 829 ntBASIC15.28■□□□□ 0.04
Rtn4Q99P72 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC15.28■□□□□ 0.04
Rtn4Q99P72 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC15.28■□□□□ 0.04
Rtn4Q99P72 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC15.28■□□□□ 0.04
Rtn4Q99P72 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC15.28■□□□□ 0.04
Rtn4Q99P72 Gm6586-201ENSMUST00000167028 643 ntBASIC15.28■□□□□ 0.04
Rtn4Q99P72 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rtn4Q99P72 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
Rtn4Q99P72 Gm27552-201ENSMUST00000183351 62 ntBASIC15.28■□□□□ 0.04
Rtn4Q99P72 Gm27844-201ENSMUST00000183613 62 ntBASIC15.28■□□□□ 0.04
Rtn4Q99P72 Gm20281-201ENSMUST00000188225 267 ntBASIC15.28■□□□□ 0.04
Rtn4Q99P72 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4Q99P72 Gm37439-201ENSMUST00000193150 856 ntBASIC15.28■□□□□ 0.04
Rtn4Q99P72 Gm42593-201ENSMUST00000198469 377 ntBASIC15.28■□□□□ 0.04
Rtn4Q99P72 Gm18598-201ENSMUST00000207724 597 ntBASIC15.28■□□□□ 0.04
Rtn4Q99P72 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Rtn4Q99P72 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4Q99P72 AC167192.4-201ENSMUST00000224087 993 ntBASIC15.28■□□□□ 0.04
Rtn4Q99P72 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtn4Q99P72 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms