Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tram1Q91V04 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tram1Q91V04 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tram1Q91V04 Gm5455-201ENSMUST00000058710 715 ntBASIC9.69□□□□□ -0.86
Tram1Q91V04 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Tram1Q91V04 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Tram1Q91V04 Gm43274-201ENSMUST00000202545 5000 ntBASIC9.69□□□□□ -0.86
Tram1Q91V04 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Tram1Q91V04 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tram1Q91V04 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC9.69□□□□□ -0.86
Tram1Q91V04 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tram1Q91V04 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tram1Q91V04 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC9.69□□□□□ -0.86
Tram1Q91V04 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Tram1Q91V04 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Gm43143-201ENSMUST00000196083 2023 ntBASIC9.68□□□□□ -0.86
Tram1Q91V04 Gm13437-201ENSMUST00000122434 1981 ntBASIC9.68□□□□□ -0.86
Tram1Q91V04 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 AC167669.2-201ENSMUST00000224417 1620 ntBASIC9.68□□□□□ -0.86
Tram1Q91V04 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
Tram1Q91V04 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Mospd4-201ENSMUST00000180618 576 ntBASIC9.68□□□□□ -0.86
Tram1Q91V04 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC9.68□□□□□ -0.86
Tram1Q91V04 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC9.68□□□□□ -0.86
Tram1Q91V04 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC9.68□□□□□ -0.86
Tram1Q91V04 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC9.68□□□□□ -0.86
Tram1Q91V04 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Tram1Q91V04 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tram1Q91V04 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tram1Q91V04 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC9.67□□□□□ -0.86
Tram1Q91V04 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tram1Q91V04 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tram1Q91V04 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tram1Q91V04 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tram1Q91V04 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tram1Q91V04 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC9.67□□□□□ -0.86
Tram1Q91V04 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Tram1Q91V04 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tram1Q91V04 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tram1Q91V04 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tram1Q91V04 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tram1Q91V04 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tram1Q91V04 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tram1Q91V04 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.67□□□□□ -0.86
Tram1Q91V04 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tram1Q91V04 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tram1Q91V04 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tram1Q91V04 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tram1Q91V04 Gm4986-201ENSMUST00000119731 549 ntBASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 186.7 ms