Protein–RNA interactions for Protein: Q8CEQ0

Cdkl1, Cyclin-dependent kinase-like 1, mousemouse

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl1Q8CEQ0 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.72□□□□□ -0.69
Cdkl1Q8CEQ0 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkl1Q8CEQ0 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cdkl1Q8CEQ0 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkl1Q8CEQ0 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkl1Q8CEQ0 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Gm37301-201ENSMUST00000195412 568 ntBASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Gm5451-201ENSMUST00000080545 579 ntBASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkl1Q8CEQ0 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdkl1Q8CEQ0 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdkl1Q8CEQ0 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdkl1Q8CEQ0 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdkl1Q8CEQ0 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.71□□□□□ -0.7
Cdkl1Q8CEQ0 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cdkl1Q8CEQ0 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cdkl1Q8CEQ0 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdkl1Q8CEQ0 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cdkl1Q8CEQ0 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cdkl1Q8CEQ0 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Gm14395-201ENSMUST00000120494 563 ntBASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Gm11836-201ENSMUST00000121022 441 ntBASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Gm8737-201ENSMUST00000122208 642 ntBASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Gm22144-201ENSMUST00000157402 102 ntBASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Gm29199-201ENSMUST00000187766 775 ntBASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Cdkl1Q8CEQ0 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms