Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Gm25732-201ENSMUST00000175168 60 ntBASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Gm4310-201ENSMUST00000177847 889 ntBASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Gm4157-201ENSMUST00000211647 679 ntBASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Gm270-201ENSMUST00000223010 976 ntBASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Gm26448-201ENSMUST00000082446 203 ntBASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc87Q8CDL9 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Mir5120-201ENSMUST00000175020 78 ntBASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Gm43138-201ENSMUST00000199123 708 ntBASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc87Q8CDL9 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Gm26047-201ENSMUST00000157308 113 ntBASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Gm26047-202ENSMUST00000198840 115 ntBASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 AU022133-201ENSMUST00000200601 873 ntBASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms