Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm45532-201ENSMUST00000210342 3620 ntBASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.17□□□□□ -0.3
Vps53Q8CCB4 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps53Q8CCB4 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Gm17230-201ENSMUST00000171194 3942 ntBASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Gm12579-201ENSMUST00000118040 783 ntBASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Mir1956-201ENSMUST00000157748 65 ntBASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Gm17877-201ENSMUST00000192578 814 ntBASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Gm44329-201ENSMUST00000197469 112 ntBASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Gm6867-201ENSMUST00000219165 425 ntBASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps53Q8CCB4 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Gm25517-201ENSMUST00000083865 134 ntBASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.15□□□□□ -0.3
Vps53Q8CCB4 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.15□□□□□ -0.3
Vps53Q8CCB4 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps53Q8CCB4 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Vps53Q8CCB4 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Vps53Q8CCB4 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms