Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Gm25076-201ENSMUST00000104098 132 ntBASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Gm11331-201ENSMUST00000119764 288 ntBASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Gm13408-201ENSMUST00000119822 798 ntBASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Gm13935-201ENSMUST00000121859 798 ntBASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Gm16570-201ENSMUST00000161951 436 ntBASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Gm10731-201ENSMUST00000181171 448 ntBASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Gm37458-201ENSMUST00000194055 410 ntBASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Gm43378-201ENSMUST00000199336 582 ntBASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Gm5302-201ENSMUST00000202130 796 ntBASIC12.41□□□□□ -0.42
Trim9Q8C7M3 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim9Q8C7M3 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Mir6979-201ENSMUST00000183927 56 ntBASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Gm43916-201ENSMUST00000205062 967 ntBASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim9Q8C7M3 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim9Q8C7M3 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.4□□□□□ -0.43
Trim9Q8C7M3 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim9Q8C7M3 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trim9Q8C7M3 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim9Q8C7M3 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Trim9Q8C7M3 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.39□□□□□ -0.43
Trim9Q8C7M3 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Gm14592-201ENSMUST00000117201 560 ntBASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Gm15881-201ENSMUST00000148792 942 ntBASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms