Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Usp47Q8BY87 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp47Q8BY87 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp47Q8BY87 Gm43334-201ENSMUST00000197740 1318 ntBASIC15.83■□□□□ 0.12
Usp47Q8BY87 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC15.83■□□□□ 0.12
Usp47Q8BY87 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Usp47Q8BY87 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC15.83■□□□□ 0.12
Usp47Q8BY87 Gm6677-201ENSMUST00000195100 441 ntBASIC15.83■□□□□ 0.12
Usp47Q8BY87 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Usp47Q8BY87 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC15.83■□□□□ 0.12
Usp47Q8BY87 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Usp47Q8BY87 AC154435.1-201ENSMUST00000223938 959 ntBASIC15.83■□□□□ 0.12
Usp47Q8BY87 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC15.83■□□□□ 0.12
Usp47Q8BY87 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp47Q8BY87 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Usp47Q8BY87 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Usp47Q8BY87 AC149588.2-201ENSMUST00000228182 1859 ntBASIC15.83■□□□□ 0.12
Usp47Q8BY87 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Usp47Q8BY87 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Gm11560-201ENSMUST00000117567 948 ntBASIC15.82■□□□□ 0.12
Usp47Q8BY87 Gm11340-201ENSMUST00000119226 412 ntBASIC15.82■□□□□ 0.12
Usp47Q8BY87 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Gm23218-201ENSMUST00000158124 276 ntBASIC15.82■□□□□ 0.12
Usp47Q8BY87 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp47Q8BY87 AC124457.1-201ENSMUST00000198845 120 ntBASIC15.82■□□□□ 0.12
Usp47Q8BY87 Gm5302-201ENSMUST00000202130 796 ntBASIC15.82■□□□□ 0.12
Usp47Q8BY87 Gm44216-201ENSMUST00000203942 157 ntBASIC15.82■□□□□ 0.12
Usp47Q8BY87 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Capsl-202ENSMUST00000226688 739 ntBASIC15.82■□□□□ 0.12
Usp47Q8BY87 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Gm5766-201ENSMUST00000160520 1977 ntBASIC15.82■□□□□ 0.12
Usp47Q8BY87 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC15.82■□□□□ 0.12
Usp47Q8BY87 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp47Q8BY87 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Smok4a-201ENSMUST00000074512 1455 ntBASIC15.81■□□□□ 0.12
Usp47Q8BY87 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Gm8876-201ENSMUST00000120768 1122 ntBASIC15.81■□□□□ 0.12
Usp47Q8BY87 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC15.81■□□□□ 0.12
Usp47Q8BY87 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Gm8255-201ENSMUST00000218693 305 ntBASIC15.81■□□□□ 0.12
Usp47Q8BY87 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Gm8181-201ENSMUST00000062242 669 ntBASIC15.81■□□□□ 0.12
Usp47Q8BY87 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp47Q8BY87 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp47Q8BY87 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp47Q8BY87 Gm45677-201ENSMUST00000209975 1341 ntBASIC15.8■□□□□ 0.12
Usp47Q8BY87 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp47Q8BY87 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp47Q8BY87 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp47Q8BY87 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp47Q8BY87 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Usp47Q8BY87 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms