Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Erich3-203ENSMUST00000189969 3460 ntBASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Gm45776-201ENSMUST00000212366 1522 ntBASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Gm4960-201ENSMUST00000182928 1001 ntBASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Gm2474-201ENSMUST00000195162 559 ntBASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Gm37860-201ENSMUST00000195380 1034 ntBASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Gm44540-201ENSMUST00000205640 354 ntBASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Gm44917-201ENSMUST00000208798 520 ntBASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 AC163638.2-201ENSMUST00000224920 827 ntBASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Gm43482-201ENSMUST00000202797 1861 ntBASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col16a1Q8BLX7 Arhgef3-204ENSMUST00000225949 3198 ntBASIC14.52□□□□□ -0.08
Col16a1Q8BLX7 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col16a1Q8BLX7 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col16a1Q8BLX7 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col16a1Q8BLX7 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC14.52□□□□□ -0.08
Col16a1Q8BLX7 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Col16a1Q8BLX7 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC14.52□□□□□ -0.08
Col16a1Q8BLX7 Gm17782-201ENSMUST00000174345 880 ntBASIC14.52□□□□□ -0.08
Col16a1Q8BLX7 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Col16a1Q8BLX7 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Col16a1Q8BLX7 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Col16a1Q8BLX7 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Col16a1Q8BLX7 Gm8525-201ENSMUST00000189674 861 ntBASIC14.52□□□□□ -0.08
Col16a1Q8BLX7 AC102523.1-201ENSMUST00000228706 1144 ntBASIC14.52□□□□□ -0.08
Col16a1Q8BLX7 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col16a1Q8BLX7 Gm10581-201ENSMUST00000097986 231 ntBASIC14.52□□□□□ -0.08
Col16a1Q8BLX7 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col16a1Q8BLX7 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC14.52□□□□□ -0.08
Col16a1Q8BLX7 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC14.52□□□□□ -0.09
Col16a1Q8BLX7 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col16a1Q8BLX7 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col16a1Q8BLX7 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col16a1Q8BLX7 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col16a1Q8BLX7 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col16a1Q8BLX7 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Col16a1Q8BLX7 Gm45206-201ENSMUST00000206885 2285 ntBASIC14.52□□□□□ -0.09
Col16a1Q8BLX7 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Col16a1Q8BLX7 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col16a1Q8BLX7 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Mir598-201ENSMUST00000102094 79 ntBASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Gm13326-201ENSMUST00000118730 1011 ntBASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Gm12950-201ENSMUST00000121683 417 ntBASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Gm22388-201ENSMUST00000158194 248 ntBASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Gm22341-201ENSMUST00000083775 129 ntBASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Gm4778-201ENSMUST00000098878 1098 ntBASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Col16a1Q8BLX7 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms