Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC14.47□□□□□ -0.09
Chd4Q6PDQ2 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 Gm6170-201ENSMUST00000187672 1388 ntBASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 Gm16518-201ENSMUST00000117960 508 ntBASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 Mir6359-201ENSMUST00000183668 81 ntBASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 AC154585.1-201ENSMUST00000218917 997 ntBASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chd4Q6PDQ2 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chd4Q6PDQ2 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chd4Q6PDQ2 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Chd4Q6PDQ2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chd4Q6PDQ2 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC14.46□□□□□ -0.1
Chd4Q6PDQ2 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.46□□□□□ -0.1
Chd4Q6PDQ2 AC122273.1-201ENSMUST00000213634 2327 ntBASIC14.46□□□□□ -0.1
Chd4Q6PDQ2 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chd4Q6PDQ2 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chd4Q6PDQ2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Gm38313-201ENSMUST00000191953 1266 ntBASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Gm37688-201ENSMUST00000195195 465 ntBASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Gm3791-201ENSMUST00000220790 768 ntBASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 AC102523.1-201ENSMUST00000228706 1144 ntBASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Gm5472-201ENSMUST00000178604 1678 ntBASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Gm37264-201ENSMUST00000194916 2192 ntBASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Gm5510-201ENSMUST00000117826 486 ntBASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Gm6291-201ENSMUST00000179994 309 ntBASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Gm43097-201ENSMUST00000196867 151 ntBASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Gm5302-201ENSMUST00000202130 796 ntBASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Gm5040-201ENSMUST00000218609 800 ntBASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 AC126257.2-201ENSMUST00000215507 2300 ntBASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chd4Q6PDQ2 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chd4Q6PDQ2 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chd4Q6PDQ2 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chd4Q6PDQ2 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.44□□□□□ -0.1
Chd4Q6PDQ2 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Chd4Q6PDQ2 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Chd4Q6PDQ2 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chd4Q6PDQ2 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Chd4Q6PDQ2 Gm22495-201ENSMUST00000104492 126 ntBASIC14.44□□□□□ -0.1
Chd4Q6PDQ2 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Chd4Q6PDQ2 Gm11235-201ENSMUST00000117763 333 ntBASIC14.44□□□□□ -0.1
Chd4Q6PDQ2 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chd4Q6PDQ2 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chd4Q6PDQ2 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chd4Q6PDQ2 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC14.44□□□□□ -0.1
Chd4Q6PDQ2 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Chd4Q6PDQ2 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Chd4Q6PDQ2 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chd4Q6PDQ2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chd4Q6PDQ2 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Chd4Q6PDQ2 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms