Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Gm12749-201ENSMUST00000122138 1159 ntBASIC9.49□□□□□ -0.89
SspnQ62147 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC9.49□□□□□ -0.89
SspnQ62147 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC9.49□□□□□ -0.89
SspnQ62147 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC9.49□□□□□ -0.89
SspnQ62147 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC9.49□□□□□ -0.89
SspnQ62147 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC9.49□□□□□ -0.89
SspnQ62147 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
SspnQ62147 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
SspnQ62147 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
SspnQ62147 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
SspnQ62147 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SspnQ62147 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Olfr169-203ENSMUST00000215476 2476 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
SspnQ62147 Gm38359-201ENSMUST00000191884 2225 ntBASIC9.48□□□□□ -0.89
SspnQ62147 Ccdc71-202ENSMUST00000193170 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Gm21039-201ENSMUST00000223359 2012 ntBASIC9.48□□□□□ -0.89
SspnQ62147 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.48□□□□□ -0.89
SspnQ62147 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
SspnQ62147 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Gm45769-201ENSMUST00000204588 1828 ntBASIC9.48□□□□□ -0.89
SspnQ62147 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
SspnQ62147 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC9.48□□□□□ -0.89
SspnQ62147 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Gm43966-201ENSMUST00000203301 612 ntBASIC9.48□□□□□ -0.89
SspnQ62147 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Gm45113-201ENSMUST00000207518 165 ntBASIC9.48□□□□□ -0.89
SspnQ62147 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Gm45575-201ENSMUST00000210283 548 ntBASIC9.48□□□□□ -0.89
SspnQ62147 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.48□□□□□ -0.89
SspnQ62147 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC9.48□□□□□ -0.89
SspnQ62147 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 AC133602.1-201ENSMUST00000227510 509 ntBASIC9.48□□□□□ -0.89
SspnQ62147 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.48□□□□□ -0.89
SspnQ62147 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
SspnQ62147 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Gm13812-201ENSMUST00000118061 1347 ntBASIC9.48□□□□□ -0.89
SspnQ62147 Gm13810-201ENSMUST00000118584 1347 ntBASIC9.48□□□□□ -0.89
SspnQ62147 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
SspnQ62147 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
SspnQ62147 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
SspnQ62147 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.48□□□□□ -0.89
SspnQ62147 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Gm44573-201ENSMUST00000191753 2370 ntBASIC9.48□□□□□ -0.89
SspnQ62147 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Gm5846-201ENSMUST00000193146 1414 ntBASIC9.48□□□□□ -0.89
SspnQ62147 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SspnQ62147 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
SspnQ62147 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SspnQ62147 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms