Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm38117-201ENSMUST00000194653 939 ntBASIC9.38□□□□□ -0.91
Tff1Q08423 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC9.38□□□□□ -0.91
Tff1Q08423 Gm8285-201ENSMUST00000208293 759 ntBASIC9.38□□□□□ -0.91
Tff1Q08423 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
Tff1Q08423 Gm17827-201ENSMUST00000211825 742 ntBASIC9.38□□□□□ -0.91
Tff1Q08423 Gm5369-201ENSMUST00000217499 588 ntBASIC9.38□□□□□ -0.91
Tff1Q08423 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Olfr1347-205ENSMUST00000220413 964 ntBASIC9.38□□□□□ -0.91
Tff1Q08423 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC9.38□□□□□ -0.91
Tff1Q08423 Gm807-202ENSMUST00000224929 408 ntBASIC9.38□□□□□ -0.91
Tff1Q08423 Gm1821-202ENSMUST00000227415 750 ntBASIC9.38□□□□□ -0.91
Tff1Q08423 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Tff1Q08423 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Tff1Q08423 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Tff1Q08423 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.38□□□□□ -0.91
Tff1Q08423 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.38□□□□□ -0.91
Tff1Q08423 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Tff1Q08423 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Tff1Q08423 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Tff1Q08423 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Tff1Q08423 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Tff1Q08423 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Tff1Q08423 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Gm22133-201ENSMUST00000102082 109 ntBASIC9.37□□□□□ -0.91
Tff1Q08423 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Gm13035-201ENSMUST00000117496 342 ntBASIC9.37□□□□□ -0.91
Tff1Q08423 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Tff1Q08423 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC9.37□□□□□ -0.91
Tff1Q08423 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Tff1Q08423 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Tff1Q08423 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Gm27530-201ENSMUST00000184096 98 ntBASIC9.37□□□□□ -0.91
Tff1Q08423 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
Tff1Q08423 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Tff1Q08423 Gm6450-201ENSMUST00000200896 574 ntBASIC9.37□□□□□ -0.91
Tff1Q08423 Gm43916-201ENSMUST00000205062 967 ntBASIC9.37□□□□□ -0.91
Tff1Q08423 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC9.37□□□□□ -0.91
Tff1Q08423 CT025551.1-201ENSMUST00000223996 692 ntBASIC9.37□□□□□ -0.91
Tff1Q08423 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC9.37□□□□□ -0.91
Tff1Q08423 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Tff1Q08423 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Tff1Q08423 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Tff1Q08423 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Tff1Q08423 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.37□□□□□ -0.91
Tff1Q08423 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Tff1Q08423 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.37□□□□□ -0.91
Tff1Q08423 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Tff1Q08423 Gm45206-201ENSMUST00000206885 2285 ntBASIC9.36□□□□□ -0.91
Tff1Q08423 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Tff1Q08423 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Tff1Q08423 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Tff1Q08423 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Tff1Q08423 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Tff1Q08423 AC159308.2-201ENSMUST00000213592 2325 ntBASIC9.36□□□□□ -0.91
Tff1Q08423 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Tff1Q08423 Gm15515-201ENSMUST00000117827 822 ntBASIC9.36□□□□□ -0.91
Tff1Q08423 Gm12501-201ENSMUST00000119163 529 ntBASIC9.36□□□□□ -0.91
Tff1Q08423 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms