Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.46□□□□□ -0.73
Cacna1aP97445 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cacna1aP97445 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cacna1aP97445 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cacna1aP97445 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cacna1aP97445 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cacna1aP97445 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Cacna1aP97445 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cacna1aP97445 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Cacna1aP97445 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cacna1aP97445 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.46□□□□□ -0.74
Cacna1aP97445 Gm14165-201ENSMUST00000121456 952 ntBASIC10.46□□□□□ -0.74
Cacna1aP97445 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC10.46□□□□□ -0.74
Cacna1aP97445 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
Cacna1aP97445 Gm16547-201ENSMUST00000159474 293 ntBASIC10.46□□□□□ -0.74
Cacna1aP97445 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cacna1aP97445 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC10.46□□□□□ -0.74
Cacna1aP97445 Gm8268-201ENSMUST00000209683 458 ntBASIC10.46□□□□□ -0.74
Cacna1aP97445 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.74
Cacna1aP97445 AC152169.1-201ENSMUST00000223901 701 ntBASIC10.46□□□□□ -0.74
Cacna1aP97445 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC10.46□□□□□ -0.74
Cacna1aP97445 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cacna1aP97445 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Cacna1aP97445 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Cacna1aP97445 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cacna1aP97445 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cacna1aP97445 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cacna1aP97445 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Cacna1aP97445 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cacna1aP97445 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cacna1aP97445 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cacna1aP97445 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Cacna1aP97445 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Cacna1aP97445 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.45□□□□□ -0.74
Cacna1aP97445 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Sidt2-202ENSMUST00000114573 4012 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Gm6158-201ENSMUST00000109467 904 ntBASIC10.45□□□□□ -0.74
Cacna1aP97445 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Gm30055-201ENSMUST00000203175 803 ntBASIC10.45□□□□□ -0.74
Cacna1aP97445 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC10.45□□□□□ -0.74
Cacna1aP97445 AC122035.1-201ENSMUST00000227576 1016 ntBASIC10.45□□□□□ -0.74
Cacna1aP97445 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Cacna1aP97445 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Cacna1aP97445 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.45□□□□□ -0.74
Cacna1aP97445 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
Cacna1aP97445 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Cacna1aP97445 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Gm45546-201ENSMUST00000211053 2394 ntBASIC10.45□□□□□ -0.74
Cacna1aP97445 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Cacna1aP97445 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.45□□□□□ -0.74
Cacna1aP97445 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC10.45□□□□□ -0.74
Cacna1aP97445 Gm37284-201ENSMUST00000193607 539 ntBASIC10.45□□□□□ -0.74
Cacna1aP97445 Gm43564-201ENSMUST00000196185 211 ntBASIC10.45□□□□□ -0.74
Cacna1aP97445 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC10.45□□□□□ -0.74
Cacna1aP97445 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.45□□□□□ -0.74
Cacna1aP97445 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC10.45□□□□□ -0.74
Cacna1aP97445 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.45□□□□□ -0.74
Cacna1aP97445 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cacna1aP97445 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cacna1aP97445 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cacna1aP97445 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cacna1aP97445 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cacna1aP97445 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cacna1aP97445 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.44□□□□□ -0.74
Cacna1aP97445 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cacna1aP97445 Gm6755-201ENSMUST00000100598 864 ntBASIC10.44□□□□□ -0.74
Cacna1aP97445 Gm6740-201ENSMUST00000100617 864 ntBASIC10.44□□□□□ -0.74
Cacna1aP97445 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cacna1aP97445 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.44□□□□□ -0.74
Cacna1aP97445 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cacna1aP97445 Gm37365-201ENSMUST00000193109 409 ntBASIC10.44□□□□□ -0.74
Cacna1aP97445 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Cacna1aP97445 AC164099.1-201ENSMUST00000227780 333 ntBASIC10.44□□□□□ -0.74
Cacna1aP97445 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Cacna1aP97445 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms