Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NrlP54846 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
NrlP54846 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NrlP54846 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
NrlP54846 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
NrlP54846 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.02□□□□□ -0.48
NrlP54846 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
NrlP54846 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
NrlP54846 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NrlP54846 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NrlP54846 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.02□□□□□ -0.49
NrlP54846 Gm12948-201ENSMUST00000119406 682 ntBASIC12.02□□□□□ -0.49
NrlP54846 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.02□□□□□ -0.49
NrlP54846 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.02□□□□□ -0.49
NrlP54846 Gm25830-201ENSMUST00000158923 132 ntBASIC12.02□□□□□ -0.49
NrlP54846 Gm24809-201ENSMUST00000175318 271 ntBASIC12.02□□□□□ -0.49
NrlP54846 Gm7719-201ENSMUST00000182374 975 ntBASIC12.02□□□□□ -0.49
NrlP54846 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NrlP54846 Gm19640-201ENSMUST00000214849 464 ntBASIC12.02□□□□□ -0.49
NrlP54846 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.02□□□□□ -0.49
NrlP54846 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NrlP54846 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NrlP54846 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NrlP54846 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NrlP54846 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NrlP54846 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
NrlP54846 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.02□□□□□ -0.49
NrlP54846 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NrlP54846 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
NrlP54846 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
NrlP54846 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
NrlP54846 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
NrlP54846 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.02□□□□□ -0.49
NrlP54846 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NrlP54846 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
NrlP54846 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
NrlP54846 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NrlP54846 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NrlP54846 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.02□□□□□ -0.49
NrlP54846 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
NrlP54846 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NrlP54846 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.01□□□□□ -0.49
NrlP54846 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NrlP54846 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NrlP54846 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NrlP54846 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
NrlP54846 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NrlP54846 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
NrlP54846 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.01□□□□□ -0.49
NrlP54846 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NrlP54846 Gm7541-201ENSMUST00000118361 535 ntBASIC12.01□□□□□ -0.49
NrlP54846 Gm14213-201ENSMUST00000119778 768 ntBASIC12.01□□□□□ -0.49
NrlP54846 Gm11354-201ENSMUST00000121974 422 ntBASIC12.01□□□□□ -0.49
NrlP54846 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.01□□□□□ -0.49
NrlP54846 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.01□□□□□ -0.49
NrlP54846 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NrlP54846 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NrlP54846 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.01□□□□□ -0.49
NrlP54846 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.01□□□□□ -0.49
NrlP54846 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.01□□□□□ -0.49
NrlP54846 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.01□□□□□ -0.49
NrlP54846 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
NrlP54846 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
NrlP54846 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
NrlP54846 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.01□□□□□ -0.49
NrlP54846 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NrlP54846 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NrlP54846 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NrlP54846 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NrlP54846 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NrlP54846 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NrlP54846 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
NrlP54846 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.01□□□□□ -0.49
NrlP54846 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NrlP54846 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.01□□□□□ -0.49
NrlP54846 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
NrlP54846 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NrlP54846 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NrlP54846 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NrlP54846 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.01□□□□□ -0.49
NrlP54846 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.01□□□□□ -0.49
NrlP54846 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NrlP54846 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
NrlP54846 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12□□□□□ -0.49
NrlP54846 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NrlP54846 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
NrlP54846 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12□□□□□ -0.49
NrlP54846 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12□□□□□ -0.49
NrlP54846 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
NrlP54846 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
NrlP54846 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12□□□□□ -0.49
NrlP54846 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
NrlP54846 Gm10728-201ENSMUST00000194292 1829 ntBASIC12□□□□□ -0.49
NrlP54846 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
NrlP54846 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NrlP54846 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12□□□□□ -0.49
NrlP54846 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
NrlP54846 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NrlP54846 Gm11578-201ENSMUST00000118530 459 ntBASIC12□□□□□ -0.49
NrlP54846 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms