Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sox3P53784 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sox3P53784 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sox3P53784 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Sox3P53784 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.86□□□□□ -0.67
Sox3P53784 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.86□□□□□ -0.67
Sox3P53784 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sox3P53784 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sox3P53784 Gm25766-201ENSMUST00000104101 131 ntBASIC10.86□□□□□ -0.67
Sox3P53784 Gm11502-201ENSMUST00000120917 1211 ntBASIC10.86□□□□□ -0.67
Sox3P53784 n-R5s84-201ENSMUST00000122591 109 ntBASIC10.86□□□□□ -0.67
Sox3P53784 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Gm18367-201ENSMUST00000176139 600 ntBASIC10.86□□□□□ -0.67
Sox3P53784 Gm9507-202ENSMUST00000180157 654 ntBASIC10.86□□□□□ -0.67
Sox3P53784 Trav11n-201ENSMUST00000200113 343 ntBASIC10.86□□□□□ -0.67
Sox3P53784 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.86□□□□□ -0.67
Sox3P53784 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.86□□□□□ -0.67
Sox3P53784 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC10.86□□□□□ -0.67
Sox3P53784 Gm8956-201ENSMUST00000203939 825 ntBASIC10.86□□□□□ -0.67
Sox3P53784 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox3P53784 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox3P53784 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sox3P53784 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sox3P53784 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sox3P53784 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Sox3P53784 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox3P53784 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sox3P53784 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.85□□□□□ -0.67
Sox3P53784 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Gm43334-201ENSMUST00000197740 1318 ntBASIC10.85□□□□□ -0.67
Sox3P53784 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.85□□□□□ -0.67
Sox3P53784 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.85□□□□□ -0.67
Sox3P53784 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC10.85□□□□□ -0.67
Sox3P53784 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.85□□□□□ -0.67
Sox3P53784 Gm6855-201ENSMUST00000206307 790 ntBASIC10.85□□□□□ -0.67
Sox3P53784 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sox3P53784 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC10.85□□□□□ -0.67
Sox3P53784 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Sox3P53784 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sox3P53784 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.85□□□□□ -0.67
Sox3P53784 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sox3P53784 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.85□□□□□ -0.67
Sox3P53784 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.85□□□□□ -0.67
Sox3P53784 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Sox3P53784 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Sox3P53784 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox3P53784 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms