Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sox2P48432 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.72
Sox2P48432 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sox2P48432 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Sox2P48432 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Sox2P48432 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.52□□□□□ -0.73
Sox2P48432 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.52□□□□□ -0.73
Sox2P48432 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Gm12957-201ENSMUST00000117835 377 ntBASIC10.52□□□□□ -0.73
Sox2P48432 Gm13296-201ENSMUST00000117854 997 ntBASIC10.52□□□□□ -0.73
Sox2P48432 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.52□□□□□ -0.73
Sox2P48432 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.52□□□□□ -0.73
Sox2P48432 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Sox2P48432 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.52□□□□□ -0.73
Sox2P48432 Gm9368-201ENSMUST00000219348 831 ntBASIC10.52□□□□□ -0.73
Sox2P48432 Gm6722-201ENSMUST00000221586 390 ntBASIC10.52□□□□□ -0.73
Sox2P48432 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Sox2P48432 Gm4978-201ENSMUST00000071565 801 ntBASIC10.52□□□□□ -0.73
Sox2P48432 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.52□□□□□ -0.73
Sox2P48432 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Sox2P48432 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Sox2P48432 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Sox2P48432 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.52□□□□□ -0.73
Sox2P48432 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox2P48432 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Sox2P48432 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
Sox2P48432 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Sox2P48432 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Sox2P48432 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Sox2P48432 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.51□□□□□ -0.73
Sox2P48432 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Gm5616-201ENSMUST00000165252 384 ntBASIC10.51□□□□□ -0.73
Sox2P48432 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Sox2P48432 Gm8741-201ENSMUST00000174736 384 ntBASIC10.51□□□□□ -0.73
Sox2P48432 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.51□□□□□ -0.73
Sox2P48432 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.51□□□□□ -0.73
Sox2P48432 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.51□□□□□ -0.73
Sox2P48432 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Sox2P48432 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.51□□□□□ -0.73
Sox2P48432 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Sox2P48432 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Sox2P48432 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Sox2P48432 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.51□□□□□ -0.73
Sox2P48432 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox2P48432 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sox2P48432 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sox2P48432 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms