Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.03□□□□□ -0.64
Gli1P47806 Gm17391-201ENSMUST00000171036 126 ntBASIC11.03□□□□□ -0.64
Gli1P47806 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.03□□□□□ -0.64
Gli1P47806 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.03□□□□□ -0.64
Gli1P47806 Gm7600-201ENSMUST00000209657 785 ntBASIC11.03□□□□□ -0.64
Gli1P47806 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Gli1P47806 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Gli1P47806 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Gli1P47806 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Gli1P47806 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Gli1P47806 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Gli1P47806 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Gli1P47806 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Gli1P47806 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gli1P47806 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Gli1P47806 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gli1P47806 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.64
Gli1P47806 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gli1P47806 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gli1P47806 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gli1P47806 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gli1P47806 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.02□□□□□ -0.64
Gli1P47806 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Gli1P47806 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gli1P47806 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Gli1P47806 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Gli1P47806 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 Gm11511-201ENSMUST00000118146 540 ntBASIC11.02□□□□□ -0.65
Gli1P47806 Selenot-ps-201ENSMUST00000119098 593 ntBASIC11.02□□□□□ -0.65
Gli1P47806 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.02□□□□□ -0.65
Gli1P47806 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.02□□□□□ -0.65
Gli1P47806 Mir6958-201ENSMUST00000184207 73 ntBASIC11.02□□□□□ -0.65
Gli1P47806 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.02□□□□□ -0.65
Gli1P47806 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 Gm8365-201ENSMUST00000197334 648 ntBASIC11.02□□□□□ -0.65
Gli1P47806 Gm43962-201ENSMUST00000203898 190 ntBASIC11.02□□□□□ -0.65
Gli1P47806 Gm8956-201ENSMUST00000203939 825 ntBASIC11.02□□□□□ -0.65
Gli1P47806 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.02□□□□□ -0.65
Gli1P47806 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Gli1P47806 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Gli1P47806 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.02□□□□□ -0.65
Gli1P47806 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.02□□□□□ -0.65
Gli1P47806 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.02□□□□□ -0.65
Gli1P47806 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.02□□□□□ -0.65
Gli1P47806 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.02□□□□□ -0.65
Gli1P47806 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gli1P47806 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Gli1P47806 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Gli1P47806 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.01□□□□□ -0.65
Gli1P47806 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.01□□□□□ -0.65
Gli1P47806 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.01□□□□□ -0.65
Gli1P47806 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.01□□□□□ -0.65
Gli1P47806 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gli1P47806 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Gli1P47806 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms