Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Gm7722-201ENSMUST00000120646 741 ntBASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.37□□□□□ -0.75
ClpxQ9JHS4 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.37□□□□□ -0.75
ClpxQ9JHS4 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Gm18065-201ENSMUST00000221395 526 ntBASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Gm8385-201ENSMUST00000058999 643 ntBASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
ClpxQ9JHS4 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Gm29615-201ENSMUST00000185371 697 ntBASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Gm28224-201ENSMUST00000186078 697 ntBASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Gm29001-201ENSMUST00000186177 697 ntBASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Gm28292-201ENSMUST00000186593 697 ntBASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Gm28101-201ENSMUST00000187608 697 ntBASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Gm29076-201ENSMUST00000187689 697 ntBASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Gm28302-201ENSMUST00000187931 697 ntBASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Gm28646-201ENSMUST00000188220 697 ntBASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Gm28205-201ENSMUST00000189177 697 ntBASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Gm29032-201ENSMUST00000189797 697 ntBASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Gm28695-201ENSMUST00000190300 697 ntBASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Gm37448-201ENSMUST00000192795 697 ntBASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Gm17812-201ENSMUST00000204935 318 ntBASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ClpxQ9JHS4 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms