Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Gm19353-201ENSMUST00000184561 445 ntBASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Mir8115-201ENSMUST00000184992 119 ntBASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Gm29067-201ENSMUST00000190821 470 ntBASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Gm12165-201ENSMUST00000117047 342 ntBASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Gm23694-201ENSMUST00000179335 110 ntBASIC11.73□□□□□ -0.53
Cpne8Q9DC53 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Gm29199-201ENSMUST00000187766 775 ntBASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.73□□□□□ -0.53
Cpne8Q9DC53 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.73□□□□□ -0.53
Cpne8Q9DC53 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cpne8Q9DC53 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpne8Q9DC53 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpne8Q9DC53 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cpne8Q9DC53 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpne8Q9DC53 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpne8Q9DC53 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpne8Q9DC53 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpne8Q9DC53 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpne8Q9DC53 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cpne8Q9DC53 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cpne8Q9DC53 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cpne8Q9DC53 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms