Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 AC166361.2-201ENSMUST00000219269 1415 ntBASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Gm17836-201ENSMUST00000191976 1302 ntBASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Gm12947-201ENSMUST00000116114 420 ntBASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Gm20493-201ENSMUST00000173706 213 ntBASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Mir8091-201ENSMUST00000183602 139 ntBASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Gm29304-201ENSMUST00000186555 695 ntBASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Gm29223-201ENSMUST00000188867 695 ntBASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Gm37921-201ENSMUST00000194333 695 ntBASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Nsmce2-203ENSMUST00000227173 1122 ntBASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 AC103672.1-201ENSMUST00000227502 365 ntBASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.56□□□□□ -0.56
Cldnd1Q9CQX5 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cldnd1Q9CQX5 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms