Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ska1Q9CPV1 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Ska1Q9CPV1 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Ska1Q9CPV1 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ska1Q9CPV1 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.7□□□□□ -0.7
Ska1Q9CPV1 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ska1Q9CPV1 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ska1Q9CPV1 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.7□□□□□ -0.7
Ska1Q9CPV1 Gm45597-201ENSMUST00000211524 1994 ntBASIC10.7□□□□□ -0.7
Ska1Q9CPV1 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ska1Q9CPV1 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ska1Q9CPV1 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ska1Q9CPV1 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ska1Q9CPV1 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Ska1Q9CPV1 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ska1Q9CPV1 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ska1Q9CPV1 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Ska1Q9CPV1 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ska1Q9CPV1 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Gm29615-201ENSMUST00000185371 697 ntBASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Gm28224-201ENSMUST00000186078 697 ntBASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Gm29001-201ENSMUST00000186177 697 ntBASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Gm28292-201ENSMUST00000186593 697 ntBASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Gm28101-201ENSMUST00000187608 697 ntBASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Gm29076-201ENSMUST00000187689 697 ntBASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Gm28302-201ENSMUST00000187931 697 ntBASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Gm28646-201ENSMUST00000188220 697 ntBASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Gm28205-201ENSMUST00000189177 697 ntBASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Gm29032-201ENSMUST00000189797 697 ntBASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Gm28695-201ENSMUST00000190300 697 ntBASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Gm37448-201ENSMUST00000192795 697 ntBASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 AY036118-201ENSMUST00000200021 923 ntBASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Gm17812-201ENSMUST00000204935 318 ntBASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Gm44967-201ENSMUST00000207047 631 ntBASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Gm45501-201ENSMUST00000211468 2526 ntBASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Ska1Q9CPV1 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ska1Q9CPV1 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms