Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.96□□□□□ -0.49
Clp1Q99LI9 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clp1Q99LI9 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Clp1Q99LI9 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Gng5-ps-201ENSMUST00000120931 205 ntBASIC11.96□□□□□ -0.49
Clp1Q99LI9 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.96□□□□□ -0.49
Clp1Q99LI9 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Gm7069-201ENSMUST00000182418 1008 ntBASIC11.96□□□□□ -0.49
Clp1Q99LI9 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.96□□□□□ -0.49
Clp1Q99LI9 Gm28064-201ENSMUST00000185639 858 ntBASIC11.96□□□□□ -0.49
Clp1Q99LI9 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Gm19918-201ENSMUST00000194858 400 ntBASIC11.96□□□□□ -0.49
Clp1Q99LI9 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC11.96□□□□□ -0.49
Clp1Q99LI9 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Clp1Q99LI9 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC11.96□□□□□ -0.49
Clp1Q99LI9 Gm43966-201ENSMUST00000203301 612 ntBASIC11.96□□□□□ -0.49
Clp1Q99LI9 CT572999.1-201ENSMUST00000220315 1260 ntBASIC11.96□□□□□ -0.49
Clp1Q99LI9 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clp1Q99LI9 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clp1Q99LI9 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clp1Q99LI9 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clp1Q99LI9 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
Clp1Q99LI9 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Clp1Q99LI9 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Clp1Q99LI9 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Clp1Q99LI9 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clp1Q99LI9 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Clp1Q99LI9 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clp1Q99LI9 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.95□□□□□ -0.5
Clp1Q99LI9 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Gm12912-201ENSMUST00000121596 1381 ntBASIC11.95□□□□□ -0.5
Clp1Q99LI9 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Gm24279-201ENSMUST00000104236 131 ntBASIC11.95□□□□□ -0.5
Clp1Q99LI9 Gm23769-201ENSMUST00000104441 121 ntBASIC11.95□□□□□ -0.5
Clp1Q99LI9 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Gm9166-201ENSMUST00000120293 561 ntBASIC11.95□□□□□ -0.5
Clp1Q99LI9 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Gm16547-201ENSMUST00000159474 293 ntBASIC11.95□□□□□ -0.5
Clp1Q99LI9 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clp1Q99LI9 Snord55-201ENSMUST00000174939 79 ntBASIC11.95□□□□□ -0.5
Clp1Q99LI9 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms