Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Smc1bQ920F6 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smc1bQ920F6 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Smc1bQ920F6 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smc1bQ920F6 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smc1bQ920F6 Gm43622-201ENSMUST00000200140 2019 ntBASIC13.11□□□□□ -0.31
Smc1bQ920F6 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smc1bQ920F6 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Smc1bQ920F6 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Smc1bQ920F6 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Smc1bQ920F6 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.11□□□□□ -0.31
Smc1bQ920F6 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Smc1bQ920F6 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.1□□□□□ -0.31
Smc1bQ920F6 AC153962.2-201ENSMUST00000219417 550 ntBASIC13.1□□□□□ -0.31
Smc1bQ920F6 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Olfr584-201ENSMUST00000098210 964 ntBASIC13.1□□□□□ -0.31
Smc1bQ920F6 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Smc1bQ920F6 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 AC129336.1-201ENSMUST00000220224 2277 ntBASIC13.1□□□□□ -0.31
Smc1bQ920F6 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.1□□□□□ -0.31
Smc1bQ920F6 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
Smc1bQ920F6 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smc1bQ920F6 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Smc1bQ920F6 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.09□□□□□ -0.31
Smc1bQ920F6 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Smc1bQ920F6 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Smc1bQ920F6 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Gm5909-201ENSMUST00000119768 1281 ntBASIC13.09□□□□□ -0.31
Smc1bQ920F6 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.09□□□□□ -0.31
Smc1bQ920F6 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Gm25604-201ENSMUST00000158359 133 ntBASIC13.09□□□□□ -0.31
Smc1bQ920F6 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC13.09□□□□□ -0.31
Smc1bQ920F6 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Smc1bQ920F6 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Gm16380-201ENSMUST00000077997 478 ntBASIC13.09□□□□□ -0.31
Smc1bQ920F6 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smc1bQ920F6 BC043934-202ENSMUST00000185694 2356 ntBASIC13.09□□□□□ -0.31
Smc1bQ920F6 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Gm5434-202ENSMUST00000222384 1451 ntBASIC13.09□□□□□ -0.31
Smc1bQ920F6 Gm5434-201ENSMUST00000071825 1451 ntBASIC13.09□□□□□ -0.31
Smc1bQ920F6 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smc1bQ920F6 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Smc1bQ920F6 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Smc1bQ920F6 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Smc1bQ920F6 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Smc1bQ920F6 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smc1bQ920F6 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smc1bQ920F6 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms