Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga6Q91XY2 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga6Q91XY2 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga6Q91XY2 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga6Q91XY2 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga6Q91XY2 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga6Q91XY2 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pcdhga6Q91XY2 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga6Q91XY2 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Pcdhga6Q91XY2 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga6Q91XY2 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Pcdhga6Q91XY2 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Gm11783-201ENSMUST00000119549 885 ntBASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Gm15610-201ENSMUST00000120584 195 ntBASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Gm42511-201ENSMUST00000196160 234 ntBASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Gm18561-201ENSMUST00000206027 804 ntBASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Gm6855-201ENSMUST00000206307 790 ntBASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Gm45135-201ENSMUST00000206787 1184 ntBASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 AC158388.3-202ENSMUST00000225517 775 ntBASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga6Q91XY2 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Mir6941-201ENSMUST00000184711 59 ntBASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Pcdhga6Q91XY2 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms