Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Gm23949-201ENSMUST00000104027 127 ntBASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Gm11663-201ENSMUST00000117888 290 ntBASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Gm4310-201ENSMUST00000177847 889 ntBASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.49□□□□□ -0.73
H2afjQ8R1M2 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.49□□□□□ -0.73
H2afjQ8R1M2 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
H2afjQ8R1M2 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Gm12857-201ENSMUST00000117678 592 ntBASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Gm11500-201ENSMUST00000118237 601 ntBASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Gm15711-201ENSMUST00000118889 535 ntBASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Gm26083-201ENSMUST00000157904 193 ntBASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Gm5982-201ENSMUST00000196234 512 ntBASIC10.48□□□□□ -0.73
H2afjQ8R1M2 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Gm7940-201ENSMUST00000218195 769 ntBASIC10.48□□□□□ -0.73
H2afjQ8R1M2 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Erich3-203ENSMUST00000189969 3460 ntBASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H2afjQ8R1M2 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms