Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Gm15573-201ENSMUST00000119487 540 ntBASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Gm22144-201ENSMUST00000157402 102 ntBASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cpsf4Q8BQZ5 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Gm11956-201ENSMUST00000119525 512 ntBASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Mir8093-201ENSMUST00000185043 137 ntBASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Gm9540-201ENSMUST00000188230 478 ntBASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Gm45770-201ENSMUST00000212105 616 ntBASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 AC154849.4-201ENSMUST00000224868 365 ntBASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.94□□□□□ -0.66
Cpsf4Q8BQZ5 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Gm14071-201ENSMUST00000117817 509 ntBASIC10.93□□□□□ -0.66
Cpsf4Q8BQZ5 Gm14263-201ENSMUST00000117955 746 ntBASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms