Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trnp1Q80ZI1 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trnp1Q80ZI1 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trnp1Q80ZI1 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trnp1Q80ZI1 Gm42858-201ENSMUST00000202512 1704 ntBASIC12.7□□□□□ -0.38
Trnp1Q80ZI1 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trnp1Q80ZI1 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trnp1Q80ZI1 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trnp1Q80ZI1 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trnp1Q80ZI1 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trnp1Q80ZI1 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trnp1Q80ZI1 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.7□□□□□ -0.38
Trnp1Q80ZI1 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Gm16288-201ENSMUST00000137940 367 ntBASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Mir1941-201ENSMUST00000157834 83 ntBASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Gm4705-201ENSMUST00000177415 354 ntBASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Gm29543-201ENSMUST00000188138 967 ntBASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Gm37688-201ENSMUST00000195195 465 ntBASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.69□□□□□ -0.38
Trnp1Q80ZI1 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Gm12470-201ENSMUST00000117239 1049 ntBASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Gm25394-201ENSMUST00000157338 133 ntBASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Gm4775-201ENSMUST00000169588 402 ntBASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Gm27444-201ENSMUST00000184157 137 ntBASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Gm43726-201ENSMUST00000199110 775 ntBASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Gm43866-201ENSMUST00000203894 839 ntBASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 AC140314.1-201ENSMUST00000219549 554 ntBASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trnp1Q80ZI1 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms