Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Gm25063-201ENSMUST00000104666 94 ntBASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Gm16397-201ENSMUST00000122201 494 ntBASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Gm29155-201ENSMUST00000185910 269 ntBASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdh19Q80TF3 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.15□□□□□ -0.63
Pcdh19Q80TF3 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Pcdh19Q80TF3 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pcdh19Q80TF3 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.15□□□□□ -0.63
Pcdh19Q80TF3 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Pcdh19Q80TF3 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Pcdh19Q80TF3 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pcdh19Q80TF3 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pcdh19Q80TF3 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pcdh19Q80TF3 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pcdh19Q80TF3 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Gm13937-201ENSMUST00000121000 988 ntBASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Gm15782-201ENSMUST00000121073 445 ntBASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Gm15744-201ENSMUST00000161734 213 ntBASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Gm9139-201ENSMUST00000218817 700 ntBASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdh19Q80TF3 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms