Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.28□□□□□ -0.76
VcanQ62059 AC158122.1-201ENSMUST00000227398 673 ntBASIC10.28□□□□□ -0.76
VcanQ62059 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC10.28□□□□□ -0.76
VcanQ62059 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
VcanQ62059 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
VcanQ62059 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
VcanQ62059 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
VcanQ62059 AC160138.2-201ENSMUST00000220255 1531 ntBASIC10.27□□□□□ -0.76
VcanQ62059 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
VcanQ62059 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
VcanQ62059 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
VcanQ62059 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
VcanQ62059 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
VcanQ62059 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
VcanQ62059 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
VcanQ62059 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
VcanQ62059 Gm6665-201ENSMUST00000165131 258 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
VcanQ62059 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
VcanQ62059 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
VcanQ62059 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC10.27□□□□□ -0.77
VcanQ62059 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.27□□□□□ -0.77
VcanQ62059 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
VcanQ62059 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.27□□□□□ -0.77
VcanQ62059 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC10.27□□□□□ -0.77
VcanQ62059 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
VcanQ62059 Daam2-201ENSMUST00000057610 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
VcanQ62059 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
VcanQ62059 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
VcanQ62059 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
VcanQ62059 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
VcanQ62059 Gm25319-201ENSMUST00000122552 325 ntBASIC10.27□□□□□ -0.77
VcanQ62059 Banf2os-201ENSMUST00000124061 771 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
VcanQ62059 Wdr17-204ENSMUST00000129132 1043 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
VcanQ62059 1700028P15Rik-203ENSMUST00000151904 519 ntTSL 3 BASIC10.27□□□□□ -0.77
VcanQ62059 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
VcanQ62059 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
VcanQ62059 Calb2-202ENSMUST00000212297 1080 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
VcanQ62059 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
VcanQ62059 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
VcanQ62059 Gm42858-201ENSMUST00000202512 1704 ntBASIC10.27□□□□□ -0.77
VcanQ62059 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC10.27□□□□□ -0.77
VcanQ62059 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
VcanQ62059 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
VcanQ62059 Gm10537-201ENSMUST00000192625 1698 ntBASIC10.27□□□□□ -0.77
VcanQ62059 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
VcanQ62059 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.27□□□□□ -0.77
VcanQ62059 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC10.26□□□□□ -0.77
VcanQ62059 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
VcanQ62059 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
VcanQ62059 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
VcanQ62059 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
VcanQ62059 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.26□□□□□ -0.77
VcanQ62059 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.26□□□□□ -0.77
VcanQ62059 1110025M09Rik-201ENSMUST00000192082 855 ntBASIC10.26□□□□□ -0.77
VcanQ62059 Gm37622-201ENSMUST00000192162 285 ntTSL 5 BASIC10.26□□□□□ -0.77
VcanQ62059 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.26□□□□□ -0.77
VcanQ62059 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
VcanQ62059 Gm22994-201ENSMUST00000175422 82 ntBASIC10.26□□□□□ -0.77
VcanQ62059 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Apex1-201ENSMUST00000049411 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 H2-DMb2-202ENSMUST00000171231 1483 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
VcanQ62059 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Mir683-2-201ENSMUST00000102099 109 ntBASIC10.26□□□□□ -0.77
VcanQ62059 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC10.26□□□□□ -0.77
VcanQ62059 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Mir683-1-201ENSMUST00000179371 109 ntBASIC10.26□□□□□ -0.77
VcanQ62059 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
VcanQ62059 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC10.26□□□□□ -0.77
VcanQ62059 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC10.26□□□□□ -0.77
VcanQ62059 AC155300.1-201ENSMUST00000219134 480 ntBASIC10.26□□□□□ -0.77
VcanQ62059 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
VcanQ62059 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms