Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Gm13045-201ENSMUST00000119019 712 ntBASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Gm7666-201ENSMUST00000146631 819 ntBASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Gm3150-201ENSMUST00000166418 204 ntBASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Gm12407-201ENSMUST00000180219 324 ntBASIC12.01□□□□□ -0.49
Syne3Q4FZC9 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Gm37835-201ENSMUST00000193305 361 ntBASIC12.01□□□□□ -0.49
Syne3Q4FZC9 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Gm43852-201ENSMUST00000202098 917 ntBASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syne3Q4FZC9 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC12□□□□□ -0.49
Syne3Q4FZC9 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Syne3Q4FZC9 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Syne3Q4FZC9 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Syne3Q4FZC9 Gm22920-201ENSMUST00000102175 109 ntBASIC12□□□□□ -0.49
Syne3Q4FZC9 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12□□□□□ -0.49
Syne3Q4FZC9 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12□□□□□ -0.49
Syne3Q4FZC9 Gm15595-201ENSMUST00000120840 961 ntBASIC12□□□□□ -0.49
Syne3Q4FZC9 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12□□□□□ -0.49
Syne3Q4FZC9 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Gm10051-201ENSMUST00000145209 414 ntBASIC12□□□□□ -0.49
Syne3Q4FZC9 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Gm20426-201ENSMUST00000173657 440 ntBASIC12□□□□□ -0.49
Syne3Q4FZC9 Gm9540-201ENSMUST00000188230 478 ntBASIC12□□□□□ -0.49
Syne3Q4FZC9 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12□□□□□ -0.49
Syne3Q4FZC9 Gm44506-201ENSMUST00000206278 965 ntBASIC12□□□□□ -0.49
Syne3Q4FZC9 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Gm14150-201ENSMUST00000122404 1354 ntBASIC12□□□□□ -0.49
Syne3Q4FZC9 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms