Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Gm10254-201ENSMUST00000052888 867 ntBASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 CT009713.10-202ENSMUST00000225734 696 ntBASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC9.63□□□□□ -0.87
Fndc4Q3TR08 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Gm10699-201ENSMUST00000098916 2130 ntBASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Crry-ps-201ENSMUST00000079090 1309 ntBASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Rims2-204ENSMUST00000226410 3685 ntBASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Fndc4Q3TR08 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms