Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tpm1P58771 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Tpm1P58771 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Tpm1P58771 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Tpm1P58771 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Tpm1P58771 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm1P58771 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.57□□□□□ -0.4
Tpm1P58771 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm1P58771 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Tpm1P58771 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tpm1P58771 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC12.57□□□□□ -0.4
Tpm1P58771 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm1P58771 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tpm1P58771 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm1P58771 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.57□□□□□ -0.4
Tpm1P58771 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm1P58771 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tpm1P58771 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC12.57□□□□□ -0.4
Tpm1P58771 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tpm1P58771 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm1P58771 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Tpm1P58771 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm1P58771 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm1P58771 Gm38117-201ENSMUST00000194653 939 ntBASIC12.57□□□□□ -0.4
Tpm1P58771 Rprl1-202ENSMUST00000198476 238 ntBASIC12.57□□□□□ -0.4
Tpm1P58771 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.57□□□□□ -0.4
Tpm1P58771 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.57□□□□□ -0.4
Tpm1P58771 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.57□□□□□ -0.4
Tpm1P58771 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.57□□□□□ -0.4
Tpm1P58771 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.57□□□□□ -0.4
Tpm1P58771 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.57□□□□□ -0.4
Tpm1P58771 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Tpm1P58771 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm1P58771 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm1P58771 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm1P58771 Spata33-207ENSMUST00000212760 4074 ntBASIC12.57□□□□□ -0.4
Tpm1P58771 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm1P58771 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Tpm1P58771 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm1P58771 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm1P58771 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm1P58771 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm1P58771 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm1P58771 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm1P58771 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm1P58771 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm1P58771 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tpm1P58771 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC12.56□□□□□ -0.4
Tpm1P58771 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC12.56□□□□□ -0.4
Tpm1P58771 Gm38271-201ENSMUST00000192296 1603 ntBASIC12.56□□□□□ -0.4
Tpm1P58771 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Gm28693-201ENSMUST00000189622 2638 ntBASIC12.56□□□□□ -0.4
Tpm1P58771 Gm42602-201ENSMUST00000200288 3224 ntBASIC12.56□□□□□ -0.4
Tpm1P58771 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.56□□□□□ -0.4
Tpm1P58771 Gm14071-201ENSMUST00000117817 509 ntBASIC12.56□□□□□ -0.4
Tpm1P58771 Gm14726-201ENSMUST00000120623 896 ntBASIC12.56□□□□□ -0.4
Tpm1P58771 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.56□□□□□ -0.4
Tpm1P58771 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.56□□□□□ -0.4
Tpm1P58771 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.56□□□□□ -0.4
Tpm1P58771 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.56□□□□□ -0.4
Tpm1P58771 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Tpm1P58771 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.56□□□□□ -0.4
Tpm1P58771 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.56□□□□□ -0.4
Tpm1P58771 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Tpm1P58771 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Tpm1P58771 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Tpm1P58771 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tpm1P58771 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tpm1P58771 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tpm1P58771 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.55□□□□□ -0.4
Tpm1P58771 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms