Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fdft1P53798 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fdft1P53798 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fdft1P53798 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fdft1P53798 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fdft1P53798 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fdft1P53798 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fdft1P53798 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fdft1P53798 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Fdft1P53798 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fdft1P53798 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Fdft1P53798 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.29□□□□□ -0.6
Fdft1P53798 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.29□□□□□ -0.6
Fdft1P53798 Gm11450-201ENSMUST00000121144 333 ntBASIC11.29□□□□□ -0.6
Fdft1P53798 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.29□□□□□ -0.6
Fdft1P53798 Gm8459-201ENSMUST00000162504 760 ntBASIC11.29□□□□□ -0.6
Fdft1P53798 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.29□□□□□ -0.6
Fdft1P53798 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.29□□□□□ -0.6
Fdft1P53798 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.29□□□□□ -0.6
Fdft1P53798 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Fdft1P53798 Gm10807-201ENSMUST00000177134 795 ntBASIC11.29□□□□□ -0.6
Fdft1P53798 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
Fdft1P53798 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fdft1P53798 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.29□□□□□ -0.6
Fdft1P53798 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.29□□□□□ -0.6
Fdft1P53798 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Fdft1P53798 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Fdft1P53798 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fdft1P53798 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fdft1P53798 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fdft1P53798 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fdft1P53798 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fdft1P53798 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.29□□□□□ -0.6
Fdft1P53798 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.29□□□□□ -0.6
Fdft1P53798 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fdft1P53798 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Fdft1P53798 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.29□□□□□ -0.6
Fdft1P53798 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fdft1P53798 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fdft1P53798 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fdft1P53798 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fdft1P53798 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fdft1P53798 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fdft1P53798 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fdft1P53798 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fdft1P53798 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.28□□□□□ -0.6
Fdft1P53798 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fdft1P53798 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fdft1P53798 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fdft1P53798 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fdft1P53798 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fdft1P53798 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fdft1P53798 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.28□□□□□ -0.6
Fdft1P53798 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.28□□□□□ -0.6
Fdft1P53798 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fdft1P53798 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Fdft1P53798 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.28□□□□□ -0.6
Fdft1P53798 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fdft1P53798 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fdft1P53798 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fdft1P53798 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Fdft1P53798 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.28□□□□□ -0.6
Fdft1P53798 Gm7851-201ENSMUST00000117574 323 ntBASIC11.28□□□□□ -0.6
Fdft1P53798 Gm12217-201ENSMUST00000118858 696 ntBASIC11.28□□□□□ -0.6
Fdft1P53798 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fdft1P53798 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.28□□□□□ -0.6
Fdft1P53798 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Fdft1P53798 Mir6927-201ENSMUST00000184494 71 ntBASIC11.28□□□□□ -0.6
Fdft1P53798 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.28□□□□□ -0.6
Fdft1P53798 Gm44008-201ENSMUST00000204345 412 ntBASIC11.28□□□□□ -0.6
Fdft1P53798 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.28□□□□□ -0.6
Fdft1P53798 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.28□□□□□ -0.6
Fdft1P53798 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.28□□□□□ -0.6
Fdft1P53798 Ntng1-201ENSMUST00000051253 327 ntBASIC11.28□□□□□ -0.6
Fdft1P53798 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fdft1P53798 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.28□□□□□ -0.6
Fdft1P53798 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Fdft1P53798 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fdft1P53798 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fdft1P53798 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fdft1P53798 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.28□□□□□ -0.6
Fdft1P53798 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fdft1P53798 Gm43999-201ENSMUST00000204286 2889 ntBASIC11.28□□□□□ -0.6
Fdft1P53798 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fdft1P53798 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fdft1P53798 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.28□□□□□ -0.6
Fdft1P53798 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fdft1P53798 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Fdft1P53798 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Fdft1P53798 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Fdft1P53798 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Fdft1P53798 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Fdft1P53798 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Fdft1P53798 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Fdft1P53798 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fdft1P53798 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Fdft1P53798 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Fdft1P53798 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.27□□□□□ -0.61
Fdft1P53798 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Fdft1P53798 Gm7857-201ENSMUST00000117957 358 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms