Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sox5P35710 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC12.32□□□□□ -0.44
Sox5P35710 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.32□□□□□ -0.44
Sox5P35710 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox5P35710 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.31□□□□□ -0.44
Sox5P35710 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Gm45041-201ENSMUST00000207366 3108 ntBASIC12.31□□□□□ -0.44
Sox5P35710 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.31□□□□□ -0.44
Sox5P35710 Gm14716-201ENSMUST00000120138 718 ntBASIC12.31□□□□□ -0.44
Sox5P35710 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.31□□□□□ -0.44
Sox5P35710 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Sox5P35710 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.31□□□□□ -0.44
Sox5P35710 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sox5P35710 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Gm8100-201ENSMUST00000182906 988 ntBASIC12.31□□□□□ -0.44
Sox5P35710 Gm27320-201ENSMUST00000184892 109 ntBASIC12.31□□□□□ -0.44
Sox5P35710 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sox5P35710 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Sox5P35710 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sox5P35710 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Sox5P35710 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.31□□□□□ -0.44
Sox5P35710 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sox5P35710 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sox5P35710 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Sox5P35710 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sox5P35710 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox5P35710 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.3□□□□□ -0.44
Sox5P35710 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox5P35710 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox5P35710 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Sox5P35710 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 Gm12247-201ENSMUST00000117585 670 ntBASIC12.3□□□□□ -0.44
Sox5P35710 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.3□□□□□ -0.44
Sox5P35710 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC12.3□□□□□ -0.44
Sox5P35710 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Sox5P35710 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 Gm25881-201ENSMUST00000157783 103 ntBASIC12.3□□□□□ -0.44
Sox5P35710 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.3□□□□□ -0.44
Sox5P35710 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.3□□□□□ -0.44
Sox5P35710 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Sox5P35710 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.3□□□□□ -0.44
Sox5P35710 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.3□□□□□ -0.44
Sox5P35710 Gm42588-201ENSMUST00000200538 1297 ntBASIC12.3□□□□□ -0.44
Sox5P35710 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Sox5P35710 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.3□□□□□ -0.44
Sox5P35710 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sox5P35710 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 AA474408-201ENSMUST00000098110 3339 ntBASIC12.3□□□□□ -0.44
Sox5P35710 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sox5P35710 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox5P35710 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms