Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm9415-201ENSMUST00000200462 1321 ntBASIC9.41□□□□□ -0.9
Col8a2P25318 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Col8a2P25318 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Gm25063-201ENSMUST00000104666 94 ntBASIC9.41□□□□□ -0.9
Col8a2P25318 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.41□□□□□ -0.9
Col8a2P25318 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Gm12194-201ENSMUST00000117756 1012 ntBASIC9.41□□□□□ -0.9
Col8a2P25318 Gm12179-201ENSMUST00000118344 1272 ntBASIC9.41□□□□□ -0.9
Col8a2P25318 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC9.41□□□□□ -0.9
Col8a2P25318 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Gm5342-201ENSMUST00000181982 1003 ntBASIC9.41□□□□□ -0.9
Col8a2P25318 Gm28324-201ENSMUST00000187913 264 ntBASIC9.41□□□□□ -0.9
Col8a2P25318 Gm18776-201ENSMUST00000188833 654 ntBASIC9.41□□□□□ -0.9
Col8a2P25318 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Col8a2P25318 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Gm42816-201ENSMUST00000198433 325 ntBASIC9.41□□□□□ -0.9
Col8a2P25318 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC9.41□□□□□ -0.9
Col8a2P25318 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC9.41□□□□□ -0.9
Col8a2P25318 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC9.41□□□□□ -0.9
Col8a2P25318 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Col8a2P25318 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC9.41□□□□□ -0.9
Col8a2P25318 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC9.41□□□□□ -0.9
Col8a2P25318 Gm3619-201ENSMUST00000219947 775 ntBASIC9.41□□□□□ -0.9
Col8a2P25318 AC122346.3-201ENSMUST00000223983 306 ntBASIC9.41□□□□□ -0.9
Col8a2P25318 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Col8a2P25318 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Col8a2P25318 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.41□□□□□ -0.9
Col8a2P25318 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.41□□□□□ -0.9
Col8a2P25318 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Gm18294-201ENSMUST00000176980 1748 ntBASIC9.41□□□□□ -0.9
Col8a2P25318 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Col8a2P25318 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Col8a2P25318 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Col8a2P25318 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.41□□□□□ -0.9
Col8a2P25318 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Col8a2P25318 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Col8a2P25318 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.4□□□□□ -0.9
Col8a2P25318 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC9.4□□□□□ -0.9
Col8a2P25318 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Col8a2P25318 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC9.4□□□□□ -0.9
Col8a2P25318 Gm13668-201ENSMUST00000119237 1001 ntBASIC9.4□□□□□ -0.9
Col8a2P25318 Gm14497-201ENSMUST00000119537 580 ntBASIC9.4□□□□□ -0.9
Col8a2P25318 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC9.4□□□□□ -0.9
Col8a2P25318 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC9.4□□□□□ -0.9
Col8a2P25318 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Col8a2P25318 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC9.4□□□□□ -0.9
Col8a2P25318 Gm37284-201ENSMUST00000193607 539 ntBASIC9.4□□□□□ -0.9
Col8a2P25318 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC9.4□□□□□ -0.9
Col8a2P25318 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC9.4□□□□□ -0.9
Col8a2P25318 Gm4811-201ENSMUST00000220879 1220 ntBASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms