Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Tnfrsf1aP25118 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Tnfrsf1aP25118 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Gm12247-201ENSMUST00000117585 670 ntBASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tnfrsf1aP25118 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 AC159308.2-201ENSMUST00000213592 2325 ntBASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Gm16481-201ENSMUST00000119074 1227 ntBASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Gm8199-201ENSMUST00000121323 823 ntBASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Gm27530-201ENSMUST00000184096 98 ntBASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Gm6905-201ENSMUST00000205729 511 ntBASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Gm45186-201ENSMUST00000206874 478 ntBASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Gm6722-201ENSMUST00000221586 390 ntBASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 CT025694.1-201ENSMUST00000226188 934 ntBASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Ntng1-201ENSMUST00000051253 327 ntBASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Btrc-209ENSMUST00000224478 2194 ntBASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms