Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
UbbP0CG49 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC9.83□□□□□ -0.84
UbbP0CG49 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
UbbP0CG49 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
UbbP0CG49 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC9.83□□□□□ -0.84
UbbP0CG49 Gm15207-201ENSMUST00000119259 442 ntBASIC9.83□□□□□ -0.84
UbbP0CG49 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
UbbP0CG49 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC9.83□□□□□ -0.84
UbbP0CG49 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
UbbP0CG49 Gm2991-201ENSMUST00000173338 480 ntBASIC9.83□□□□□ -0.84
UbbP0CG49 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC9.83□□□□□ -0.84
UbbP0CG49 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC9.83□□□□□ -0.84
UbbP0CG49 Gm4857-201ENSMUST00000192718 785 ntBASIC9.83□□□□□ -0.84
UbbP0CG49 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC9.83□□□□□ -0.84
UbbP0CG49 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC9.83□□□□□ -0.84
UbbP0CG49 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC9.83□□□□□ -0.84
UbbP0CG49 Gm9797-202ENSMUST00000218003 294 ntBASIC9.83□□□□□ -0.84
UbbP0CG49 Gm6653-201ENSMUST00000218063 1288 ntBASIC9.83□□□□□ -0.84
UbbP0CG49 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC9.83□□□□□ -0.84
UbbP0CG49 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
UbbP0CG49 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
UbbP0CG49 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
UbbP0CG49 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
UbbP0CG49 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
UbbP0CG49 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UbbP0CG49 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC9.82□□□□□ -0.84
UbbP0CG49 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Gm45495-201ENSMUST00000200940 1700 ntBASIC9.82□□□□□ -0.84
UbbP0CG49 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
UbbP0CG49 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
UbbP0CG49 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
UbbP0CG49 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
UbbP0CG49 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
UbbP0CG49 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
UbbP0CG49 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC9.82□□□□□ -0.84
UbbP0CG49 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC9.82□□□□□ -0.84
UbbP0CG49 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC9.82□□□□□ -0.84
UbbP0CG49 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Gm17420-201ENSMUST00000164753 153 ntBASIC9.82□□□□□ -0.84
UbbP0CG49 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC9.82□□□□□ -0.84
UbbP0CG49 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC9.82□□□□□ -0.84
UbbP0CG49 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.82□□□□□ -0.84
UbbP0CG49 AC166349.1-201ENSMUST00000220866 695 ntBASIC9.82□□□□□ -0.84
UbbP0CG49 AC159205.5-202ENSMUST00000224849 386 ntBASIC9.82□□□□□ -0.84
UbbP0CG49 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UbbP0CG49 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
UbbP0CG49 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms