Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.63□□□□□ -0.55
CopeO89079 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
CopeO89079 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CopeO89079 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CopeO89079 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CopeO89079 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
CopeO89079 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CopeO89079 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
CopeO89079 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CopeO89079 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CopeO89079 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CopeO89079 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CopeO89079 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CopeO89079 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CopeO89079 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.62□□□□□ -0.55
CopeO89079 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
CopeO89079 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
CopeO89079 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.62□□□□□ -0.55
CopeO89079 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
CopeO89079 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
CopeO89079 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.62□□□□□ -0.55
CopeO89079 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.62□□□□□ -0.55
CopeO89079 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.62□□□□□ -0.55
CopeO89079 Gm22846-201ENSMUST00000157706 270 ntBASIC11.62□□□□□ -0.55
CopeO89079 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.62□□□□□ -0.55
CopeO89079 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.62□□□□□ -0.55
CopeO89079 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.62□□□□□ -0.55
CopeO89079 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.62□□□□□ -0.55
CopeO89079 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
CopeO89079 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Gm25857-201ENSMUST00000082788 129 ntBASIC11.62□□□□□ -0.55
CopeO89079 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
CopeO89079 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
CopeO89079 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CopeO89079 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CopeO89079 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.61□□□□□ -0.55
CopeO89079 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CopeO89079 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CopeO89079 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CopeO89079 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CopeO89079 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CopeO89079 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CopeO89079 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CopeO89079 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CopeO89079 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CopeO89079 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.61□□□□□ -0.55
CopeO89079 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.61□□□□□ -0.55
CopeO89079 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CopeO89079 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
CopeO89079 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CopeO89079 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
CopeO89079 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CopeO89079 Gm12857-201ENSMUST00000117678 592 ntBASIC11.61□□□□□ -0.55
CopeO89079 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CopeO89079 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.61□□□□□ -0.55
CopeO89079 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CopeO89079 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CopeO89079 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.61□□□□□ -0.55
CopeO89079 Gm3332-201ENSMUST00000189337 928 ntBASIC11.61□□□□□ -0.55
CopeO89079 Gm38266-201ENSMUST00000194931 421 ntBASIC11.61□□□□□ -0.55
CopeO89079 Gm5714-201ENSMUST00000197343 566 ntBASIC11.61□□□□□ -0.55
CopeO89079 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.61□□□□□ -0.55
CopeO89079 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CopeO89079 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.61□□□□□ -0.55
CopeO89079 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CopeO89079 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.61□□□□□ -0.55
CopeO89079 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.61□□□□□ -0.55
CopeO89079 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.61□□□□□ -0.55
CopeO89079 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CopeO89079 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CopeO89079 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CopeO89079 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CopeO89079 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.61□□□□□ -0.55
CopeO89079 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CopeO89079 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
CopeO89079 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CopeO89079 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.61□□□□□ -0.55
CopeO89079 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms