Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.85□□□□□ -0.67
Hcn1O88704 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.85□□□□□ -0.67
Hcn1O88704 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.84□□□□□ -0.67
Hcn1O88704 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hcn1O88704 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Hcn1O88704 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.84□□□□□ -0.67
Hcn1O88704 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.84□□□□□ -0.67
Hcn1O88704 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Hcn1O88704 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.84□□□□□ -0.67
Hcn1O88704 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.84□□□□□ -0.67
Hcn1O88704 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.84□□□□□ -0.67
Hcn1O88704 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.84□□□□□ -0.67
Hcn1O88704 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC10.84□□□□□ -0.67
Hcn1O88704 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hcn1O88704 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC10.84□□□□□ -0.67
Hcn1O88704 Gm28937-201ENSMUST00000185413 695 ntBASIC10.84□□□□□ -0.67
Hcn1O88704 Gm29400-201ENSMUST00000187208 695 ntBASIC10.84□□□□□ -0.67
Hcn1O88704 Gm28662-201ENSMUST00000188446 695 ntBASIC10.84□□□□□ -0.67
Hcn1O88704 Gm28251-201ENSMUST00000188835 695 ntBASIC10.84□□□□□ -0.67
Hcn1O88704 Gm37318-201ENSMUST00000194325 695 ntBASIC10.84□□□□□ -0.67
Hcn1O88704 Gm38017-201ENSMUST00000194768 695 ntBASIC10.84□□□□□ -0.67
Hcn1O88704 Gm37287-201ENSMUST00000195449 695 ntBASIC10.84□□□□□ -0.67
Hcn1O88704 Gm37793-201ENSMUST00000195548 695 ntBASIC10.84□□□□□ -0.67
Hcn1O88704 Gm44100-201ENSMUST00000204329 436 ntBASIC10.84□□□□□ -0.67
Hcn1O88704 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.84□□□□□ -0.67
Hcn1O88704 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Hcn1O88704 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Hcn1O88704 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Hcn1O88704 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Hcn1O88704 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Hcn1O88704 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hcn1O88704 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hcn1O88704 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Hcn1O88704 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Hcn1O88704 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcn1O88704 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Hcn1O88704 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.83□□□□□ -0.68
Hcn1O88704 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hcn1O88704 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hcn1O88704 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcn1O88704 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcn1O88704 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcn1O88704 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcn1O88704 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcn1O88704 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Hcn1O88704 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcn1O88704 Gm13916-201ENSMUST00000117368 628 ntBASIC10.83□□□□□ -0.68
Hcn1O88704 Gm12579-201ENSMUST00000118040 783 ntBASIC10.83□□□□□ -0.68
Hcn1O88704 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.83□□□□□ -0.68
Hcn1O88704 Gm15595-201ENSMUST00000120840 961 ntBASIC10.83□□□□□ -0.68
Hcn1O88704 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.83□□□□□ -0.68
Hcn1O88704 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hcn1O88704 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.83□□□□□ -0.68
Hcn1O88704 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.83□□□□□ -0.68
Hcn1O88704 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcn1O88704 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hcn1O88704 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Hcn1O88704 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Hcn1O88704 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hcn1O88704 Gm6867-201ENSMUST00000219165 425 ntBASIC10.83□□□□□ -0.68
Hcn1O88704 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC10.83□□□□□ -0.68
Hcn1O88704 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.83□□□□□ -0.68
Hcn1O88704 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcn1O88704 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcn1O88704 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms